Pseudomonas parafulva YAB-1, XB13_RS21410

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas parafulva strain YAB-1 contig14, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGACCAAGCCGTTTACCAAGGAAGAACTGATCGAGGCAATACAGGCCCATGTGCCTGGGTTTGCCACAGCCCAACAAACAGCACCCTGACCGTGCCCTG CCCTGGCACGGTCTTACGAATCCTGATGGGGAACCAGTATGGCCCGCGTTCTGATTGTCGACGATTCGCCGACAGAAATGTATAAGTTGACCCAATGGCT GGAAAAGCACGGGCACGAGGTACTCAAGGCCAATAACGGCGCCGATGGCGTGGCCCTTGCCCGGCAAGAGAAGCCGGATGCAGTGCTCATGGACATCGTG ATGCCAGGCATGAACGGCTTCCAGGCCACTCGCCAGCTCAGCAAGGACCCGGAGACCAAGGCCATTCCGGTCATTGTGGTGACCACCAAGGACCAGGAGA CCGACCGCATCTGGGCGACGCGCCAGGGCGCACGTGACTTCCTGACCAAGCCCGTGGAAGAAGATGCGCTGGTGCAAAAGCTCCAAGAGGTGCTGGGGGC
DNA Sequence for Gene
>XB13_RS21410
TTGACCACACGCCCGCAGGGGGCGTCGCTGACCGCCTTCGAACTGTTGCTGGATATCGATCGCCGCTGCCGGCTGCTGGTGGCCGACCAGCCAGCTTCGG GTGACAGGTTGCAGCAGTGGAGCGGCATCGGTTTTCGTGTAGCCGGGCAATGGTTCGTCGCCCCCATGGGCGAGGTGGCCGAAGTGCTGCGTGAGCCCCG CAGTAGCCGAGTACCCGGTGTACAACCCTGGGTATGCGGGGTGGCCAATCTGCGTGGCCGGCTACTGCCCGTGATGGACCTGGGCCGTTTCCTCGGCCTG GGCAGTGCCGTGCCAGGCAAGCAGCGCCGCGTCCTGGTGCTCGATCACGAGGCGCTTTTCGTTGGTCTGCTGGTGGACGAAGTGGTGGGCCTGCAGCACT TTGCTATCGACAGCCTGCAACCTGCGCTGCCAGTGACCGATGCTGCCGGGCCCTTCGTTCAGGGGCGCTTCGAACGCGACCACGACTACTGGGCGATCTT CAGCCCCTTTGCCCTGGCCCAGGCACCGGGCTTTCTCGATGTGGCGTTATAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GACCTTGCAAACGTGAACCAGCCTGCTCCCCCCGTCACCGCCACCACCGTGAGCCCCCGCACCCGCAGCATTGCGCAGATCACCGTGCTGTTCCTGATCC TGATCCTCTCGATCATTCTGCTGTTCGCCAATTTCGCCTACCTCAACACCCAGTCCAACTACGACAAGCAGTACATCGGCCATGCCGGCGAGCTGCGCGT GCTGTCCCAGCGCATTGCCAAGAACGCCACTGAAGCGGCTGCCGGCAAGGGTGTGGCCTTCAGGCTGCTGTCCGATGCGCGCAACGACTTCGAGCGTCGC TGGGGCTACCTGCGCGAAGGCGACAAGGCCACTGGCCTGCCCGCAGCGCCACCCTCGGTGCGCGAAGAAATGGAAGCGGTGCGCGATGACTGGGAGAGCC TGCGCAAGAGCACCGACACCATCCTGGCCAGCGAACAGACCGTGCTGTCCTTGCACCAGGTGGCGGCAACCCTGGCCGAAACCGTCCCGCAGTTGCAGGT
Amino Acid Sequence
>protein PilI
MTTRPQGASLTAFELLLDIDRRCRLLVADQPASGDRLQQWSGIGFRVAGQWFVAPMGEVAEVLREPRSSRVPGVQPWVCGVANLRGRLLPVMDLGRFLGL GSAVPGKQRRVLVLDHEALFVGLLVDEVVGLQHFAIDSLQPALPVTDAAGPFVQGRFERDHDYWAIFSPFALAQAPGFLDVAL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site