Pseudomonas parafulva YAB-1, XB13_RS16845

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas parafulva strain YAB-1 contig11, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGGCCGCTCCTACCCCGGGAGGCGTTAGCCTTCAGATGCGGTGCTAGGCAGGCGATGACACGGCGTGAAGCACAGGCCTACCCGGACCTGTGGGAGCGGC CTCGCGCCGCGATGGGCCGCAAAGCGGCCCCAAGATCTAAAGCGCGCCCACCATCTCCGCGGCTCTTACCCCGTAGGGCACCCAGCACCCCCGCATTCAG CACCACATCACACACCCTAACCCCCAAGCGACTACCCCGACACGCTTGTCAGACTCAAGACCCCCACCACGTCAGCCCCATTCTCCATCGGTCATCCCCC CGCCCATAAACCCTGCACGCCCCGGCCAACCCAGGCAGAACCACCTCTCCAACCACCCCCCACCCTAAGCCCACTCCCGACCAATCCGGTAACCATTACC CCATCCCCAACCCTGTCCCACCCCCACCTCCAGCGCTAGGGTTAACCCCGCAGCCCAAGGAACAGGCTGCCAGAAACGACCAACCCTAGGAGTCTTCATC
DNA Sequence for Gene
>XB13_RS16845
ATGCGTAAAAACCTGCTCACCGCGCTGCTGCTCCCACTCATCGCCAGCCTTTCGTTCACCGTAAACGCAGCACCGACCAATGCCACGACCATGGTCGAAC CCATGGCGATGGTCGCCCAGGCAAGCCAGTCAGCAACCCCGCTGGTCGATCTCAACAGCGCAGATGCCCTGACGCTCCAGAAAGAACTCAACGGCATCGG CAAGGCAAAGGCCGAGGCAATCGTCGCCTACCGCGAAGCCCACGGGCCATTCGCGTCGGTCGATGAATTGCTCGAGATAAAAGGCATCGGCAATGCGCTG CTAGAACGCAACCGCGACAAACTGAAAGTGCAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTACAGAGGGGCGGGCCTTCGACAGGCCCGCTCATTGAAAGGCCATCAACCGCATTCAGCGGTCTTGCGCATCCCGGGCATCGGCCTCGGCGTTGCGTTC ATGAACCTTGCGCAACTGCTCGTCAGTCAACGGCAGCTTCTTAGCCGTGTCGCGCAGCATCATCAAACCGCCGACGATCGAGCCAATGGCAACGATGAGT ATCAGCCAGGCATACCAAGGCATTTTCCTTCTCCTGTTGCGAATGTAAGCGGCTTGCTCACCTGTTTTGAGCCAGGCGCCGCTTCGTTGGTTCAATGGTA CGGCGCCTCACGCAGGCCCAGCACCCACCGGCCCACATCCTGGCCCACCGTCCGACCAATTCCTGGGCCAGCGGCCCCCCAGCCTGCGTCACATCGTTTA CAATGCGCGCCGTTTCCGACTTGCCAAGAGACCCTGCCATGCCTGCTTGCCAGACGCCCCTGATCGTCGCCCTGGACTTCCCTACCCGCGAAGCCGCCCT
Amino Acid Sequence
>competence protein ComEA
MRKNLLTALLLPLIASLSFTVNAAPTNATTMVEPMAMVAQASQSATPLVDLNSADALTLQKELNGIGKAKAEAIVAYREAHGPFASVDELLEIKGIGNAL LERNRDKLKVQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site