Strain | Pseudomonas aeruginosa strain F22031, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
AACCTGCTGAAGAAGATCAGCTTCCCGCGCATCTGCCTGCCGGTCATCGTACTGCTCAACGCCGGGGTCAATTTCGCCATCATCCTCGCCTTGTTCCTCG GCTTTCTCGCCCTCAGCGGGCGCCTGCCGGGCGCGGCATTGCTCGCGCTGGTGCCGCTGCTGGCGATCCAGGTGCTGTTCGCGGCGGGACTGGGGATGAT CCTAGGGGTGCTCAACGTGTTCTTCCGCGACGTCGGCCAGTTGTTCGGCATCTGCCTGCAGTTCTGGTTCTGGCTGACGCCGATCGTCTATCCGATCGGC ATCCTGCCCGAGGGTATCCGCTCGCTGATCGAACTCAACCCGATGACCGCGCTGATGCGCAGCTACCAGCAGCTGTTCCTCCACGGGCAATGGCCGGACT GGCCTTCATTGCTGCCGATCACCCTGCTGGCGCTGCTGCTGTGCGCGCTCGGCCTGCGTCTGTTCCGCCAGCGGGTCGGCGAAATGGTGGATGAACTCTG
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DNA Sequence for Gene |
>F22031_RS11015
ATGGGACAGATACGCGTATCCGGCCTCGGCAAGGCCTACAAGCAGTATCCCAATCGCTGGAGCCGGTTGTTCGAATGGCTGGTGCCTTTCAGCCCTTCGC GCCACCACCTGCACTGGATCCTGCGCGAGGTCGAGTTCACCATCGAGCCGGGCGAAGCGGTCGGCATCGTCGGGGTCAACGGCGCCGGCAAGAGCACCTT GCTGAAGATGATCGCCGGCACCACCCAGCCGACCTGCGGCGAGATCCGCGTGGCCGGCCGGGTCGCCGCGCTGCTCGAGCTGGGCATGGGCTTCCACCCG GACTTCACCGGCCGGCAGAACGTCTTCATGGCCGGGCAACTGCTGGGCATGCAGGTCGAGGAAATCCAGGCGCTGATGCCGGATATCGAGGCCTTCGCCG AAATCGGCGAGGCCATCGAGCAACCGGTGCGCACCTACTCCAGCGGCATGCAGATGCGCCTGGCGTTCAGCGTGGCGACTGCCCGGCGGCCGGACATCCT GATCGTCGACGAGGCCCTGTCGGTCGGCGATGCCTATTTCCAGCACAAGAGCTTCGAGCGCATCCGCAGTTTCCGCAAGGCCGGCACCACCCTGCTGATC GTTTCCCACGACCGCTCGGCGATCCAGTCCATCTGCGACTCCGCGATCCTCCTGGAGCAGGGACGGATGGCCATGCGCGGGCGGCCGGAAGAGGTGATGG ACTACTACAACGCCCTGCTCGCCGAGCGCGAGGGGCAGACCGTGCGCCAGGAAATGCTCGCCGACGGCCAGGTGCGGACGATTTCCGGCACCGGCGAGGC AGCGATCCTCGACGTACGGATGGTCGACCAGCGGCAGCGCGCGCTGGAGGTGGTCGAGGTAGGCCAGGCGGTGACGCTGGAAGTCGAGGTCGAGGTTCGC CAGGACATCGAGCGGCTGATCCTCGGCTTCATGATCAAGGACCGCCTCGGCCAGCCGATGTACGGGATCAATACCCACCGCCTGGACAAGGCGCTCACCG ACCTGAAGGCCGGCGAGCGCATCACCTACCGCTTCGCCTTCGACATGCGCCTGGGCAAGGGGCACTACTCGGTGGCGCTGAGCCTGTCGCGGCTGGACTC GCACCTGGACCGCAACTTCGAATGGCGCGACTACGGCCTGGTCTTCCATGTCATCAACAACCGCCAGGAAGACTTCGTCGGTTGCTCCTGGCTGGGCGCC GAAACCCATATCAGCCGCTCCGGCGAGGCGGCTCTGGACCCCACTTCCGCGGAGAGCACTCCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGCGTCTGTTGGTCGAATGCACCTATGTGTTCGAGCATCCCAAGGTCAATTCTGGTATTCAGCGGGTGGTGCGCAACGTCATCCGCGAGTTGCCGGAAGC CGACGAGACGGTGGAGTGCATCCCGGTGGCAATGCTCGACGGCACCCTGTATCAGGTCCACAGCCTGGCGCCGCTGGACCCGCGGCCGCATTCGCCGCTG GTACGCCTGCGCATCCTGGTGGAGCGAGCCGCCAACTACTTCTGGCTGGGCCAGCGCACCCTGGAAAAGCGCCGCCCGTTCCGTTCCTCGCCGTGGGCCC GGCGCCTTCTCTATGTAGCCTGCCGCCTGTTCGCCTTCGCCTTCCTCAGCATTCCGCTGCGCCTGCTCGACCGCATCCTCGGCAAGCAGCAGCCTGCACC CGTGCGCGCGACCCCGCTCGAACATCGGGCCGGCGACCAACTGGTCTTGCTGGACTCCTCCTGGCACGCCGATTTCTTCCCGCTGGCGGAACGCCTCAAG
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Amino Acid Sequence |
>sugar ABC transporter ATP-binding protein
MGQIRVSGLGKAYKQYPNRWSRLFEWLVPFSPSRHHLHWILREVEFTIEPGEAVGIVGVNGAGKSTLLKMIAGTTQPTCGEIRVAGRVAALLELGMGFHP DFTGRQNVFMAGQLLGMQVEEIQALMPDIEAFAEIGEAIEQPVRTYSSGMQMRLAFSVATARRPDILIVDEALSVGDAYFQHKSFERIRSFRKAGTTLLI VSHDRSAIQSICDSAILLEQGRMAMRGRPEEVMDYYNALLAEREGQTVRQEMLADGQVRTISGTGEAAILDVRMVDQRQRALEVVEVGQAVTLEVEVEVR QDIERLILGFMIKDRLGQPMYGINTHRLDKALTDLKAGERITYRFAFDMRLGKGHYSVALSLSRLDSHLDRNFEWRDYGLVFHVINNRQEDFVGCSWLGA ETHISRSGEAALDPTSAESTP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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