Pseudomonas viridiflava LMCA8, RT94_RS03635 (carB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas viridiflava strain LMCA8 contig_8, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCTGGAAACCGAAACCCCGGTCTTCGGCATCTGCCTGGGTCACCAGCTGCTCGCTCTGGCCTCCGGCGCCAAGACTGTAAAAATGGGCCATGGCCACCAC GGTGCCAACCACCCGGTTCAGGATCTGGACACCGGTGTCGTCATGATCACCAGCCAGAACCACGGTTTCGCGGTAGACGAAGCCACGCTGCCAGCCAACG TGCGCGCCATCCACAAGTCGCTGTTCGACGGCACCCTGCAGGGTATCGAGCGTACCGACAAGAGCGCCTTCAGCTTCCAGGGTCACCCTGAAGCCAGCCC TGGCCCGAGCGACGTCGCGCCGCTGTTTGACCGCTTTATCGAAGCCATGGCCAAGCGACGCTGACCGGTTGCCTTGAGACTGTAGTAAGCAGGTGACCTG GCTGGACCCGGACAATACATCCGGTCGCTGCCACCCAGGCCACCTCCATGAAATGTTCAAGACGGCTTGCCGACTGACCTGCGGATTTGAGTGACAACCC
DNA Sequence for Gene
>RT94_RS03635 |carB
ATGCCAAAACGTACAGATATTAAAAGCATCCTGATTCTCGGCGCCGGCCCCATCGTGATCGGCCAGGCCTGTGAATTCGACTACTCCGGCGCCCAGGCCT GCAAGGCTCTGCGCGAAGAGGGTTACCGCGTCATCCTGGTGAACTCCAACCCGGCCACCATCATGACCGACCCGGCCATGGCCGACGCTACCTACATCGA GCCGATCAAGTGGCAGACCGTTGCCAAGATCATCGAGAAAGAGCGTCCGGATGCACTGCTGCCAACCATGGGCGGCCAGACTGCACTGAATTGTGCGCTG GATCTGGAGCGCGAAGGCGTTCTGGAGAAGTTCGGCGTCGAAATGATCGGTGCCAACGCTGACACCATTGACAAGGCTGAAGACCGTTCGCGTTTCGACA AGGCGATGAAATCCATCGGTCTTGACTGCCCGCGCTCCGGCATCGCCCACTCGATGGAAGAAGCCAATGCTGTTCTTGAGCGCCTCGGCTTCCCTTGCAT CATCCGTCCGTCCTTTACCATGGGCGGCACCGGTGGCGGTATCGCTTACAACCGTGAAGAGTTCGAAGAAATCTGCGCCCGTGGTCTGGACCTGTCGCCA ACCAAGGAACTGCTGATCGACGAATCGCTGATCGGCTGGAAAGAGTACGAGATGGAAGTGGTCCGCGACAAAAAGGACAACTGCATCATCGTCTGCTCCA TCGAAAACTTCGACCCGATGGGCGTGCACACCGGTGACTCGATCACTGTGGCGCCAGCACAGACCCTGACCGACAAGGAATACCAGATCCTGCGTAACGC CTCCCTGGCGGTACTGCGCGAGATCGGCGTTGAAACCGGTGGCTCCAACGTTCAGTTCGGTATCTGCCCGGATACTGGCCGCATGGTCGTGATCGAGATG AACCCGCGTGTTTCGCGTTCCTCGGCACTGGCTTCCAAGGCGACCGGTTTCCCGATTGCCAGAATCGCGGCCAAGCTGGCTGTTGGCTACACGCTGGACG AGCTGTCCAACGACATCACCGGCGGCAAGACCCCGGCTTCGTTCGAGCCATCCATCGACTACGTCGTCACCAAGCTGCCGCGCTTTGCGTTCGAGAAGTT CGCCAAGGCCGATGCTCGCCTGACCACCCAGATGAAATCGGTGGGTGAAGTCATGGCCATCGGTCGCACCTTCCAGGAATCCCTGCAGAAAGCCCTGCGT GGTCTGGAAGTGGGCGTCTGCGGTCTTGATCCGAAGCTCGATCTGAGCCATCCGGAAAGCATGAGTACGCTCAAGCGCGAGCTGACCGTTCCGGGTGCCG AGCGTATCTGGTACGTCGCTGACGCCTTCCGCGCCGGCATGAGCGTCGAAGATATCTTCGCCATGAACATGATTGACCCTTGGTTCCTGGTCCAGATCGA AGATCTGATCAAGGACGAAGAGAAGGTCAAGACACTGGGTCTGTCGGCCATCGATCGCGACCTGATGTTCCGCCTCAAGCGCAAGGGCTTCTCCGATGCC CGTCTGGCCAAGCTGCTGGGCGTGACCGAGAAGAACCTGCGTACACATCGCCACAAGCTGGAAGTGTTCCCGGTCTACAAGCGCGTCGACACTTGCGCCG CCGAGTTCGCGACCGACACCGCGTACCTGTACTCGACGTACGAAGAAGAGTGCGAAGCCAACCCTTCGACGCGCGATAAGATCATGATTCTGGGCGGCGG TCCAAACCGTATCGGCCAGGGCATCGAGTTCGACTACTGCTGTGTACACGCCGCTCTGGCGCTGCGTGACGACGGGTACGAGACCATCATGGTCAACTGC AACCCGGAAACCGTTTCCACCGATTACGACACGTCCGATCGTCTGTACTTCGAGCCGGTCACGCTGGAAGACGTACTGGAAATCGTGCGCGTCGAGAAGC CGAAGGGTGTGATCGTCCAGTACGGTGGCCAGACGCCGCTGAAGCTGGCTCGTGCGCTGGAAGCCGCAGGCGTGCCGATCATCGGCACCAGCCCTGACGC CATCGACCGTGCAGAAGACCGTGAGCGCTTCCAGCAGATGGTCGAGCGTCTGAATCTGCGTCAGCCGCCAAACGCAACTGTGCGCAGCGAAGACGAAGCG ATTCGTGCTGCCGCCAAGATCGGTTATCCGCTGGTTGTGCGTCCATCCTATGTACTGGGTGGTCGTGCGATGGAAATCGTTTACCAGGAAGACGAACTCA AGCGTTACCTGCGTGAAGCGGTTCAGGTCTCCAACGACAGCCCGGTGCTGCTGGACCACTTCCTGAACTGCGCCATCGAAATGGACGTCGATGCTGTCTG CGATGGCACTGACGTTGTGATCGGCGCGATCATGCAGCACATCGAGCAGGCGGGCGTTCACTCCGGTGACTCCGCGTGCTCGCTGCCGCCGTACTCGCTG CCGGCTCACATCCAGGACGAGATGCGCGAACAGGTCAAGAAGATGGCGCTGGAGCTGGGCGTTGTCGGCCTGATGAACGTGCAGTTGGCCTTGCAGGGCG AAGACATCTACGTCATCGAAGTCAACCCGCGTGCATCTCGTACCGTGCCGTTCGTGTCCAAGTGCATCGGCGTTTCCCTGGCCATGATCGCTGCGCGCGT GATGGCAGGCAAAACCCTGAAAGAGCTGAACTTCACCAAGGAAATCATTCCTAATTTCTACAGTGTGAAAGAAGCGGTGTTCCCGTTCGCCAAGTTCCCG GGTGTTGACCCGATCCTCGGCCCGGAGATGAAGTCGACCGGCGAAGTGATGGGCGTGGGCGACACCTTCGGTGAAGCGTTCGCCAAGGCTCAGATGGGCG CCAGCGAAGTGCTGCCGACCGGTGGTACCGCATTCATCAGCGTTCGTGACGATGACAAGCCTTTGGTGGCGGGTGTTGCGCGTGACCTGATCAGTCTTGG CTTCCAGATCGTTGCGACGGCGGGTACCGCCAAGCTGATCGAAGCAGCGGGCTTGAAGGTTCGCCGCGTCAACAAGGTCACCGAAGGTCGTCCGCACGTG GTCGACATGATCAAGAATGACGAAGTCACCCTGATCATCAACACCACCGAAGGCCGTCAGTCGATCGCGGATTCCTATTCCATTCGTCGCAACGCCTTGC AGCACAAGATTTACTGCACCACTACTATTGCAGCGGGCGAAGCCATCTGCGAAGCGCTCAAGTTCGGTCCAGAGAAGACTGTACGTCGCTTGCAGGATCT CCATGCAGGATTGAAGGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCAAATACCCAATGACTGTTCAGGGCGCTCGCGCCCTGGAAGAAGAATTGACGCATCTGACCAAGGTGGTCCGTCCCAAGCTGAGCCAGGACATCGGCAC GGCGCGGGAGCTGGGCGACCTGAAGGAAAACGCTGAATACCATGCTGCCCGTGAACAGCAGGGCATGGTCGAGGCGCGTATCCGTGACATCGAAGGCCGT ATGCAGAATGCTGTGGTGATCGACGTCACCACCATTCCTCACACCGGCAAGGTGATTTTCGGCACGACCGTGGAAATCGCCAACGTTGAAACGGACGAGA GCGTCACGTATCAGATCGTCGGTGAGGATGAAGCGGACATCAAGAAGGGCAAGATTTCGGTGGGCTCGCCCATCGCCCGCGCTTTGATTGCCAAAGAAGA AGGCGATGTCGTTGTCGTGAAGACGCCCAGCGGCGTGATCGAGTACGAAATCGTCGAGGTTCGTCACATCTAAGGCTCGGTGCCCGCTTATGGCGGGCGC
Amino Acid Sequence
>carbamoyl phosphate synthase large subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMADATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCAL DLEREGVLEKFGVEMIGANADTIDKAEDRSRFDKAMKSIGLDCPRSGIAHSMEEANAVLERLGFPCIIRPSFTMGGTGGGIAYNREEFEEICARGLDLSP TKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEM NPRVSRSSALASKATGFPIARIAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPRFAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALR GLEVGVCGLDPKLDLSHPESMSTLKRELTVPGAERIWYVADAFRAGMSVEDIFAMNMIDPWFLVQIEDLIKDEEKVKTLGLSAIDRDLMFRLKRKGFSDA RLAKLLGVTEKNLRTHRHKLEVFPVYKRVDTCAAEFATDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIMVNC NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLARALEAAGVPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEA IRAAAKIGYPLVVRPSYVLGGRAMEIVYQEDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVDAVCDGTDVVIGAIMQHIEQAGVHSGDSACSLPPYSL PAHIQDEMREQVKKMALELGVVGLMNVQLALQGEDIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELNFTKEIIPNFYSVKEAVFPFAKFP GVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGGTAFISVRDDDKPLVAGVARDLISLGFQIVATAGTAKLIEAAGLKVRRVNKVTEGRPHV VDMIKNDEVTLIINTTEGRQSIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRRLQDLHAGLKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site