Pseudomonas viridiflava LMCA8, RT94_RS03380

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd03220
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0140359 ABC-type transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd03220
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd03220
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 44 248 1.3E-46
Pfam PF14524 Wzt C-terminal domain IPR029439 Wzt, C-terminal 302 441 1.1E-24
CDD cd10147 Wzt_C-like IPR029439 Wzt, C-terminal 301 441 9.83394E-27
Gene3D G3DSA:2.70.50.60 - - - 291 440 2.0E-37
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 42 253 3.6E-46
PANTHER PTHR46743 TEICHOIC ACIDS EXPORT ATP-BINDING PROTEIN TAGH - - 5 424 6.5E-105
CDD cd03220 ABC_KpsT_Wzt IPR015860 ABC transporter, teichoic acids export TagH-like 8 239 7.84122E-107
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 62 250 1.1E-11
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 53 185 1.4E-20

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.