Pseudomonas viridiflava LMCA8, RT94_RS26785

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas viridiflava strain LMCA8 contig_72, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GAGCCTGGCTTTTTGCGTGGACGGATCGATCTCGACCAGCAACTGACCTTCCTTGACCTGATCGCCCACCTGCACATGAATCTTCATGATCTGCCCGGTT GCCTGCGAGCCCACGTCCACATAACTGCGCGGTTGCAGCGTGCCCAGCGCCGTCACGCTGTTTTCAATGCTGCTGCGCGTGACGGTGACGGTAGGCGTCC TGTTGTGGTCGCCCGGCAGGATCTGCCACGCGCACACCGCGATGACCGGAAACAGGCACAGTGCCGCGAGGACAGTGCGTCGAGGGAGTCGAGAGCGTTT CATGCAGGGTTCCTGCCTGGAAAAAATCGGCCGGTCGACGGGCGACGGCTACTGGGGCTGTCATTAAGACGAGGGGAGTGCGGCGGAATTTAGCGCTGTC AATTAATTGGCTTTGTTCACTAAATTTTGTTCTGCCGAATCGTTTAAGGGGAGCGGCTCATTCCAGCCGTGTTCCGTTTTCCTTTCGAGGTGGAGTCAGC
DNA Sequence for Gene
>RT94_RS26785
ATGATCATGTCCAGGCCGTTGTCCGGTTTAATTGTCGCGGGTCTGTCGTTCGGGCTGGTTTTGCCCGCGCAGGCACTGGTTGCTCCCGAGCATCAGAACG CTTCGGCGCAGGTGCGTCGCACGACATTTGGCGTGCCACATATCGTGGCCGCTGACGAACGCGGGCTGGGTTATGGCATCGGTTACGCCTATGCCCAGGA CAATCTGTGCCTGCTGGCGAGCGAGATCGTCACGGTCAATGGCGAGCGCTCCCGCTATTTCGGGCCGGACAAGGCGACCCTCGAACAGCGCAACAATATG GCCAGCGACCTGCTATTCAAATGGTTGAACACGCCTGAAGCACTCGCGGATTTCTGGAAGGCCCAGCCGCCCGAAATTCGTCAATTGATGCAAGGTTACG CGGCTGGCTATAACCGCTCGCTGGACGAGCAGAATGCCAGAGGTCTGCCCACAGCCTGCGCCGCCGGATGGGTACGACCGATCAGTACCGACGATCTGGT GCGCCTGACGCGTCGATTGCTGGTCGAGGGTGGCGTGGGGCAGTTCACTGAAGCGCTGGCCGGTGCTAGACCGCCGCAAGCGGGTGCTCAGGCCAGCCTC CAGACCGAGCAGCGTGAGGCCCTGCAACTGGTCGCCGCGCGCAATGAACAGTTTGCGCTGGAGCGTGGCAGCAATGCGGTGGCGATCGGGCGCAAGCTGT CCGCCAACGGCCGCGGCATGTTGCTGGCCAACCCGCATTTTCCGTGGGGCGGTGGCATGCGTTTCTACCAGATGCACCTGACCATTCCCGGCAAACTGGA CGTGATGGGTGCTGCGTTGCCGGGTCTGCCGCTGATCAACATCGGCTTCAACCAGCACCTGGCCTGGACCCACACTGTCGATACGTCCAAACACTTCACG CTGCATCGGCTGACGCTTGATCCTAGGGATTCGGCGCGTTACATGCTCGACGGCAAGTCAGTAGCGATGGACAAGCAACAGGTGAGTGTCGAAGCGAGAC AGGCGGACGGCAGCATCAAGCCTGTAACCCGCACGATCTATTCGTCGAAATTCGGCCCTGTGGTGCAATGGCCGGGCAAGCTGGACTGGGACGACAAGTA CGCCTTCAGCCTGCGCGATGCAAACCTCAAGAATGACCGCGTGCTGCAGCAGTGGTACGCCATGGATCAGGCAAAAAGCCTCAAGGCGTTTCAGGATTCG GTACGCAGCATTCAGGGCATCCCGTGGGTGAACACCGTGGCGGTCGATGCCAAGGGTCAGGCGCTGTACATGAACCTGTCGGTGGTGCCGAATGTCGACG CGGTCAAGCTTGCCAAGTGCAGCGACCCGCGCATCGGCACCGAGCTGATTATCCTCGACGGTTCGCGCAGCGACTGTAACTGGGACATCGCGCCCGAGGC AGCGCAACCCGGCATCTATCCGTCGTCACGTCAGCCGCAATTGCTGCGGACCGACTTCGTGCAGCATTCCAATGACTCGGCCTGGATGGTCAATCCGGCG GTGCCGCAGAAAAACTTTTCGCCGCTGATCAGCCAGGAAGGCCAGCCGCTCGGGCTGCGCGCGCGTTTCGCGCTGGATCGACTCGGCAAACTGCAGCAGT CGGGCAAGGTCAGCGTCGAGAACCTGCAGGCCATGGTGATGGACAACGAGGTGTATCAGGCCGGGCAGGTGTTGCCTGATCTTTTGCAGTTTTGTGCGAC AGGACTGGGTGATGACGAAAAGCGCCTGGCACCGCTGTGCACGGCATTGAAAGCCTGGGACGGTCGAGTCGACCTGAGCAGTGGTGTGGGCTTCGTGTAC TTCCAGAAAATCATGACCGCGATGCAGTCCGTCGGTTCGCGCTGGCGGGTAGTGTTCGATGCCAACGATCCGATTCACACGCCCCGTGGTCTGGCCATCG AGTACCCGGAAGTCGCCACGGCGTTACGCGCTGCCATGCTGACGGCGCAGGACGAGGTGAGCAAGGTGGGCCTGACGGCGAAGACGACCTGGGGTGATAT TCAGGTGTCGAGCCAAAGCGGTGTATCGGTTCCGATCCACGGCGGTCCTGCGGTACTGGGCGTTTACAATGCCATGCAGACAGTGGCGGGCAAGGATGGC AAGCGAGAAGTGGTCAGCGGTACCAGCTACCTGCAAGTGGTGACATTCGACGAAAATGGACCGCAGGCCAAGGGATTATTGGCGTTCTCCGAATCGAGCA ATCCGCAGTCGGCGCATTCGCGGGATCAAACCGAGGCGTTCTCCAATAAGCGGTGGGCTGACCTGCCGTTTACCGAGCAGCAGATCAAGGCTGATCCGGC GTATCAGGTGCAGGAAGTCAGGGAGCAACTTTCCCCGCCCGTGCATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTAGTCAAAAGCTGAATCAGGCAATAGCAGTGATTGGGCCGCACGGCCCAATTCACCTGCCAAGCACAAGGCTTCAACCGCCCTGAGTATCGATATCGGC ATCAACGCCCTGAGTCGGCTGATGATTACGTTGAGTCTGAGGCTTCTCCTGCGGCTCATAGTCAGGCACGTAGGCGCTTTTTTCAGACGATCCTTGCGAT TGGCTCTGGCTCTGACTTTGCTGTTGATTCTGACGCTGACCGTCATGCTCGCTCGAATCCGGTACAGCATCCGGCTCTTGCGGATCGATGGCCGGATCGT TGCGTTCCGTGCCCTGGTCCGGCGGCGTGTGCTGACCGGGTGCCTGTTCTTTTTGCCGTTGCGGTTCGGTAGACATGAATACCTCGAAAGTCTGCTTCAT AAATGGCTGACAGACTTTCGAGATCTGGGGGAGGGGGTTCGTTCGATCGGATTGCCGAGTGGTATGAGCGGGCTGACTGGGCACGATCAGTACGCTTGAG
Amino Acid Sequence
>acyl-homoserine lactone acylase subunit beta
MIMSRPLSGLIVAGLSFGLVLPAQALVAPEHQNASAQVRRTTFGVPHIVAADERGLGYGIGYAYAQDNLCLLASEIVTVNGERSRYFGPDKATLEQRNNM ASDLLFKWLNTPEALADFWKAQPPEIRQLMQGYAAGYNRSLDEQNARGLPTACAAGWVRPISTDDLVRLTRRLLVEGGVGQFTEALAGARPPQAGAQASL QTEQREALQLVAARNEQFALERGSNAVAIGRKLSANGRGMLLANPHFPWGGGMRFYQMHLTIPGKLDVMGAALPGLPLINIGFNQHLAWTHTVDTSKHFT LHRLTLDPRDSARYMLDGKSVAMDKQQVSVEARQADGSIKPVTRTIYSSKFGPVVQWPGKLDWDDKYAFSLRDANLKNDRVLQQWYAMDQAKSLKAFQDS VRSIQGIPWVNTVAVDAKGQALYMNLSVVPNVDAVKLAKCSDPRIGTELIILDGSRSDCNWDIAPEAAQPGIYPSSRQPQLLRTDFVQHSNDSAWMVNPA VPQKNFSPLISQEGQPLGLRARFALDRLGKLQQSGKVSVENLQAMVMDNEVYQAGQVLPDLLQFCATGLGDDEKRLAPLCTALKAWDGRVDLSSGVGFVY FQKIMTAMQSVGSRWRVVFDANDPIHTPRGLAIEYPEVATALRAAMLTAQDEVSKVGLTAKTTWGDIQVSSQSGVSVPIHGGPAVLGVYNAMQTVAGKDG KREVVSGTSYLQVVTFDENGPQAKGLLAFSESSNPQSAHSRDQTEAFSNKRWADLPFTEQQIKADPAYQVQEVREQLSPPVH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site