Pseudomonas viridiflava LMCA8, RT94_RS03175

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas viridiflava strain LMCA8 contig_7, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GAACGGCGTGCTGTTCGATGGCTTCCCGCGCACCATTCCACAGGCCGAGGCATTACTGAAAGCCGGTCTGGAAATCGACCATGTGCTGGAAATCGCTGTT GATGACGAAGAAATCGTCCAGCGTATGTCCGGTCGCCGTGTCCACCCGGCATCCGGTCGCACCTATCATCTGGTTTACAACCCGCCCAAGGTTGAAGGCA AGGACGATGCGACTGGCGAAGATCTGGTTCAGCGCCCTGACGATGTGGCAGAAACCGTGCGTCATCGCCTTGCTGTCTACCACGAGCAGACCAAGCCGCT GGTGGAGTTCTACAGCAAGCTCAGCGCTCAGAATGGCAAGCCCAAGTGCAGCCACATCCCAGGTGTTGGCTCTGTAGAAGATATCACCGCCAAAGTGCTG AAAGCACTGAGCTGAATCGACATTGCTTCTCGACAATGGCCCGCTTGCGGGCCATTTGTCATTTATACTGCGCCACTTTTCCATGACGACGGACACACCG
DNA Sequence for Gene
>RT94_RS03175
ATGACCACCTTGCTGGCCCTGGACACCGCCACTGAAGCCTGCTCGGTCGCTTTGCTGCATGACGGCAAGGTACTGAGCCACTACGAGGTGATCCCGCGCC TGCATGCCCAGCGCCTGTTGCCGATGATCAAGGACCTGCTGGCCGAGGCAGGTATTGCGATGTCGGCGCTGGATGCCATTGCGTTCGGCCGTGGTCCGGG TGCATTCACCGGCGTACGGATTGCTATTGGCGTGGTTCAGGGGCTGGCATTCGCGCTGGAGCGTCCGGTATTGCCGGTCTCCAATCTGGCGGTGCTGGCA CAGCGCGCCTTTCGCGAGCAAGGCGTGTTGCAGGTGGCGGCTGCCATCGATGCGCGAATGGATGAAGTCTATTGGGGCTGTTATCGCGAAACAGCAGGCG AGATGCGTCTGGTCGGTGCCGAAGCGGTGATGGCGCCGGAGCTGGCCGCATTGCCCGCTGACATAACGGGTGAATGGTTCGGTGCCGGTACGGGGTGGGG CTACGCCGAGCGTATCCCGGTCGCGTTGGCCGGGCATGATGCAAGCCTGTTGCCTCACGCACAGGATCTGCTGACACTGGCCGCCTTTGCCTGGCAGCGC GGCGAAGCCGTTCAGGCCGATGATGCGCAGCCGGTGTATCTGCGTGACAAGGTTGCCACGCCGAAGGCGCGTTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TACTCGCGCGGCAACTCGCAAGTTATGGCGATTGCAACGGTTGTATCAATTCGCCATCTACCGTTTATCGTTTTAGTGTGACTTAAAACGCTCGAGCTCA AACAATTTGCAATATGTGTGGTCTAGTTAACGTTAGGGAGTTTGCCAGTATCCGGACTGTAACGTTAAATTGCCACTACAGAAGCCGAGTAAATATTGAT GCGCATCGACGGACCATCACAACGTTCTTACCCCATCAAGCGAAAGCCGCAGAAGCAGCCTTCGACGGTTGAGGGTTCTTTCGAAGAAGTCACCACCGAC ATTGATCTGCCGGTGCCTGCGCGCGCGTCCCGTCGCGACGCTGACCAGGGTCCGATCGGCAGTACTGGCAACGTACCTGCACGTCCTCAGGACATCATCT TTCCCCGCTCCATGAGCTCTCGTGTCGCCAATGCCTTGGCCAGTTACCTGACCACGGCCAGCTTTGTGGATTGGGACCTTGAAGTATCGGGGCTCGATCT
Amino Acid Sequence
>peptidase M22
MTTLLALDTATEACSVALLHDGKVLSHYEVIPRLHAQRLLPMIKDLLAEAGIAMSALDAIAFGRGPGAFTGVRIAIGVVQGLAFALERPVLPVSNLAVLA QRAFREQGVLQVAAAIDARMDEVYWGCYRETAGEMRLVGAEAVMAPELAALPADITGEWFGAGTGWGYAERIPVALAGHDASLLPHAQDLLTLAAFAWQR GEAVQADDAQPVYLRDKVATPKAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site