Pseudomonas viridiflava LMCA8, RT94_RS26730

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas viridiflava strain LMCA8 contig_69, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAGATGCTCCAGTCGGACCTGGCCAAGGTAGGCATCAAGCTCGACATTCGCATCATGGAATGGGGCGAAATGCTCAAGCGCGCCAAGAAGGGCGAACATG ACATGGTCTTCGCTGGATGGGCCGGCGACAACGGCGACCCGGACAACTTCCTGACACCCAACCTGAGCTGCGATGCAGCGAAGAATGGCGAGAACTATGC ACGCTGGTGCAACAAGGAATTTGAAGCGGCAATCACCGAAGCCCGGAAAATTACCGAACCGAGCGAACGGGCTGCCCTCTATAAGCAGGCTCAAAAAGTG TTCAATCAGGAACAGCCCTGGATCAGCCTGGCTTATCCGAAGCTGTTCGTGGCAATGCGCAAAAATGTCGAAGGCTTTCATATCAGCCCGCTGACCAATA ACAACTTCACCACGACCGGGGTGAAGTAGAAAAAACCACCGCCTGCGCCCCACAAGGGCAAGGGCGGTACGCCTGACCGGCTGATGAGGTACACCACAAG
DNA Sequence for Gene
>RT94_RS26730
ATGTTTAGTTTTATTGCCCGCCGGGTGGGGTTACTGATCCCTACCTTCTTCGGCATTACCCTGCTGACGTTCGCACTGATCCGTCTGATTCCGGGCGACC CTGTGGAAGTCATGATGGGCGAGCGCCGGGTTGACCCGGAAATGCACGCCCAGGCCATGGAACGCCTTGGCCTGAACAAGCCGCTCTATGCCCAGTACAT CGATTACATCGGCAAGCTCGCCCAGGGCGACCTCGGTGAATCGTTGCGTACGCGCACCAGCGTCTGGACCGAGTTCACTTCGCTGTTCCCGGCAACCCTC GAGTTGTCGCTGGCAGCCCTGATCTTCGCAGGTGTCCTCGGGCTTCTGGCCGGGGTGATCGCCGCACTCAAGCGAGGGTCCCTGTTCGACCATGGGGTCA TGGGGATTTCCCTCGCCGGTTATTCCATGCCGATCTTCTGGTGGGGCCTGATCCTCATCATGTTCTTCTCGGTGTCGCTGGGCTGGACGCCCGTGTCCGG GCGGATCGACCTGCTGTATGACATTCCGCCAGTGACCGGCTTCATGCTGATCGACACCCTGCTCAGCGATGAACAAGGCGCGTTCCTCGACGCCCTGCAT CACCTGATTCTTCCGGCCATCGTGCTGGGTACCATTCCGCTGGCGGTAATCGCCCGGATGACCCGTTCGTCGATGCTCGAAGTGCTGCGTGAAGACTACG TGCGTACCGCAAGGGCCAAGGGCCTGTCGCCTGCACGCGTGGTGTTCGTTCACGGCCTGCGCAACGCGCTTATTCCGGTCCTGACCGTTTTCGGCCTGCA GATCGGCACCTTGCTGGCCGGTGCGGTCCTGACCGAAACGATCTTCTCCTGGCCGGGCATCGGCAAGTGGCTGATCGAAGCCATCGGCGCCCGCGATTAT CCGGTCGTGCAAAACGGCATCCTGCTGATCGCCTGCCTGGTGATCCTGGTCAACTTCGTGGTGGACATCCTCTACGGCTTTGCCAACCCACGCATCCGTC ACCAGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GATCATCGATATGAGCACACCTACTCCTTCGGTAGCAGTCGATCAAAGCCTGCTTTACCCGTCCCCGTACAAAGAGTTCTGGCAAGCGTTCTCCAAGAAC AAAGGTGCCGTTGCCGGCCTGATCTTCATGATCATCATCGTGTTCTGCGCGCTGTTCGCCCCCTGGGTTGCGCCGCATGACCCGAGCGAGCAATACCGTG ACTTCCTGCTGACCCCGCCGGTCTGGCTGGAAGGCGGCCAATGGCAGTTCATCCTCGGCACCGACGAACTGGGCCGCGACCTGCTGTCGCGCCTGATTCA AGGCTCGCGCCTGTCGCTGCTGATCGGCCTGTCTTCGGTGGTCATGTCGCTGATTCCCGGCATCCTGCTGGGCCTGCTGGCGGGTTTCTTCCCGCGCATT CTGGGTCCGTCGGTGATGCGCCTGATGGACATCATGCTCGCCCTGCCCTCGCTGCTGCTGGCGGTTGCCATCGTCGCCATCCTTGGCCCTGGCCTGATCA
Amino Acid Sequence
>peptide ABC transporter permease
MFSFIARRVGLLIPTFFGITLLTFALIRLIPGDPVEVMMGERRVDPEMHAQAMERLGLNKPLYAQYIDYIGKLAQGDLGESLRTRTSVWTEFTSLFPATL ELSLAALIFAGVLGLLAGVIAALKRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVSLGWTPVSGRIDLLYDIPPVTGFMLIDTLLSDEQGAFLDALH HLILPAIVLGTIPLAVIARMTRSSMLEVLREDYVRTARAKGLSPARVVFVHGLRNALIPVLTVFGLQIGTLLAGAVLTETIFSWPGIGKWLIEAIGARDY PVVQNGILLIACLVILVNFVVDILYGFANPRIRHQR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site