Pseudomonas viridiflava LMCA8, RT94_RS25340

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas viridiflava strain LMCA8 contig_63, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGGCGTTCTACGGCATGTCGACGTTCGAAGGGCCGATGATGGCGATCAAGACGGTCAACTCGCTGTCGCACTACACCGACTGGACCATTGGCCACGTGC ACTCCGGCGCGCTGGGCTGGGTGGCGATGATCACCATTGGCGCAACCTACCACCTGATCCCCAGGGTGTTCGGCCGTCCGCAGATGCACAGCATCGGCCT GATCAATGCACATTTCTGGCTGGCAACCATCGGCACCGTGTTGTACATCACCTCGATGTGGGTCAACGGCATCACACAAGGCCTGATGTGGCGCGCAATC AACACCGACGGCACGCTCACCTACTCCTTTGTCGAAGCCATGCAGGCCAGCCATCCCGGCTACGTGGTGCGGTTTATCGGCGGTGCGATTTTCACCAGTG GCATGTTCCTGATGGCGTGGAACGTAGGGCGCACGGTACGCGCTTCCAGCCCTGCAGAAGCAGAGGCAGCGGCCCGTATCACCGTAGTGGGGGCGCACTG
DNA Sequence for Gene
>RT94_RS25340
ATGAAGCATGAAGTGCTGGAAAAGAACATCGGCCTGCTCGCCCTGTTCATGGTCATTGCAGTGAGCATCGGTGGTCTGACACAAATCGTCCCGCTGTTCT TTCAGGACGTGACCAATCAGCCTATCGAAGGCATGAAGCCGCGCACGGCGCTGGAGGTGGAAGGCCGCGACGTCTATATCGCCAACGGCTGTGTGGGTTG CCATTCGCAGATGATTCGCCCTTTCCGGGCTGAAACCGAGCGTTACGGGCATTATTCGGTCGCAGGCGAAAGCGTCTGGGATCACCCTTTCCTGTGGGGC TCGAAACGCACCGGGCCGGATCTGGCGAGAGTCGGCGGTCGCTACTCGGACGACTGGCACCGCGCGCACCTGTACAACCCGCGCGACGTGGTACCTGAAT CGAAAATGCCTGCCTACCCGTTTCTGGTCGAAAAGGTACTCGACGGCAAGGACACCGCGAAAAAGCTCGAAGTGCTGCGCACGCTGGGCACGCCTTACAC CGATGCCGATATCGCCGGTGCTGCGGCGGCCGTGCAAGGCAAGACCGAGATGGACGCGCTGGTCGCGTACCTGCAAGGCCTCGGCACCCTCATCAAGAGC AAACGGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACATGATGGACATCGGAATGATTCGAGGCCTTGGCACGCTGGTGGTGATGGTGGCGTTCATCGGCCTGACGCTGTGGGTGTTCAGCCCGAAGCGCAAGGC CGAGTTCGATGACGCAACGCTGCTGCCGTTCGCCGATGATCCTGAAGCCATCAGCAAAGTCGCGCGGTCCACAACGTCCCGGAGCGATGCGCCATGAGTA CGTTCTGGAGCCTGTATGTCTCGGTCCTGACGCTGGGCACGCTGGTCGCTCTGGTCTGGCTGCTGATGGCGACCCGCAAGGGCGAGCGCAAGGATCACAC CGACGAAACCATGGGCCACTCCTTTGACGGCATTGAGGAATACGACAACCCTCTGCCCAACTGGTGGTTCAAGCTGTTCATCGGCACCATCGTGTTTGCC GTGGGCTATCTGGTGCTGTATCCGGGCCTGGGCAACTGGCAAGGCCTGCTGCCTGGCTACACCTATCTGGACAAGGACAAACAGCTGCAATTTGCCGACG
Amino Acid Sequence
>cbb3-type cytochrome c oxidase subunit II
MKHEVLEKNIGLLALFMVIAVSIGGLTQIVPLFFQDVTNQPIEGMKPRTALEVEGRDVYIANGCVGCHSQMIRPFRAETERYGHYSVAGESVWDHPFLWG SKRTGPDLARVGGRYSDDWHRAHLYNPRDVVPESKMPAYPFLVEKVLDGKDTAKKLEVLRTLGTPYTDADIAGAAAAVQGKTEMDALVAYLQGLGTLIKS KR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site