Pseudomonas viridiflava LMCA8, RT94_RS25280

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas viridiflava strain LMCA8 contig_63, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAGACCGATGTGGTTTCCAGTGCCTGCGCGGAAACCGGATACGCCTGGGCGTCCATCCCGGACATGCCGACCAGTTCGCTGGGCAGGTGAAAGCCCGTGA GCTGTTCTTCACCGGCGTCACTGATGCTGAAGGTTTTCAATGCACCGGAGCGAACGGCATAGACCGACTCGAAGGTATCGCCTTGACGAAACAGGAACTC GCCTTTTTTCAACGGGCGGCCGCGCTTGACGATCTGGTCAAGCGACTCCATGTCTTCGAGGTTCAGCGAGAGGGGCAGGCAGAGCGGGGCGAGACTGCAA TCCTTGCAATGAGCCTGGGTTGAAGCACGTGACTTGGCGGGCTCGGACATCACTTAATTCCTTGTGGGAAAACACACATAAGACGTAAGGGTAACTCACC CAATGCAAGTAGGGCCAGTCTGGAAATTTTCCGGACCATCAAGGTTTCAATGGCATCGGCGATAGCCTTTTCAACTTTAATCTGATGCAGGATGCCGCTT
DNA Sequence for Gene
>RT94_RS25280
ATGTCGATCACAGGAATGCCTGGCCTGACCCTCAACCTCCCGACGCAGGTCTCACAGCCGACTGTTAGCAAGGCTCATGTCGAGAGCGCTCCTCCCGATG CTGAAACGGCGCCGCGTCAGTCCCCAGGCGTTCAGGTCAATCTGTCGCCTGAAGGCAAGGCGGCAGCCTCATCAGCCTCCCGGGATTCGGATATCGAGCA GAGCGGCCTGCCGGAAGGCGTGCAAAAAATCCTCAAGGCCATTCGCGAAGTGCAGCGCAAGATCGAGGAATTGCAGCAGCAGATCCAGCAGGTCCTGGCT GATCGAGGACCCGGTGAAGACGAGCGCAATTCACGTATTGCGACACTGAGGTCCTCTATGGGCAGGCTGCAGCAACAGGTCAGCAACTACAGTGCCGATC TGTCAGTGTTGATGAGCCGTCTCAAACTCGATGGGGGAAGCAGAACACTGGTGAGCTCGTTGATGGTGCCCAATGAGGCAAGGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGCACCGTTCAATGACTGCGCCTGTTCCGTTTGTTGTCGTCCTGCATGTAAAGGTTCGTATAAGCCCGCCGATAGGCTTGTATTCCTTAATCAGCTGTA GGATTTTTCGTCATGACGATAACTACTTCGCCTGTTGGCGGGATTACGTTGACGCCTGTAACGTCGCAGATTACCCCTCGTCCTCAAGAAGCCGTAGCCG AGGTGTCTGCCAGTCCAGCGGAGGGCATAAGGGTCAATCTTTCGAGCGAGGGCAGGGCAGCTGCGTCTTCCTCGTCAAAGGATTCGGACATTGAGCAGAG TGGCCTGCCGAAGTCGGTTCAGAAGATCCTCAAGGCCATCCGCGAACTGCAACGCCAGATCACCGAACTGACGGTGCAGATCCAGCAAGTGCTTACGGAT CCGCGTCTTTCCGATGACGAGCGCAAGAGCAAGGCTGCAGGTCTCCAGGCCGTGCTCAGTATGTTGCAAGCGCAGATCAGTAATTCCAGTGATGACCTCA
Amino Acid Sequence
>hypothetical protein
MSITGMPGLTLNLPTQVSQPTVSKAHVESAPPDAETAPRQSPGVQVNLSPEGKAAASSASRDSDIEQSGLPEGVQKILKAIREVQRKIEELQQQIQQVLA DRGPGEDERNSRIATLRSSMGRLQQQVSNYSADLSVLMSRLKLDGGSRTLVSSLMVPNEAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site