Pseudomonas viridiflava LMCA8, RT94_RS25220

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas viridiflava strain LMCA8 contig_63, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGCACGAGGACGGTGCCAGCGGTTCGCTTGAACCGTCACGGGACCTGGAAGACGAGCGCTTCCAGGCAGCCCTGGCCGATGCGATTGCCAATTTGCCGGA GCGTGAGCGTCTGGTCTTGGCGCTGTACTACGACGAAGAGCTGAACCTCAAGGAAATCGGAGAGGTCCTGGGGGTCAGCGAATCGCGGGTCAGTCAGTTA CACAGCCAGTGCGCAGCTCGTTTGCGAGGGCGTTTGGGGGAGTGGCGAGCGCGTTGACAGTCAAGGTGCGGCCTGGTCCGCACATTGGCTTCATGCCGGC TGTGCAGAGCGTTACGTGGTAACAGGATAGACAAGGCAGGAGCCTGTCGGGCGGTGCCTCGATGGGCTGTTCGTTCAGGTCTGTACCTGTCGTTTTGCCA AGCCCGTCGTCGTTTCGTACAGCCGGGGGTGTGCTGTGCCAGTATTGAGTGAACAGCGTGTTCAGGTGCTGAACGCGTTAAAGACTGCTTGGAGGTCGAA
DNA Sequence for Gene
>RT94_RS25220
TTGGACAAGAACATGAAAATCCTCATCGTTGATGACTTCTCAACGATGAGGCGGATCATCAAGAACCTGTTGCGTGATCTGGGGTTCACCAACACATCGG AAGCGGACGACGGTCTGACCGCGCTGCCGATGTTGCAGAGCGGCGCCTTTGACTTTCTGGTGACGGACTGGAACATGCCTGGCATGTCCGGTATCGATCT GCTGCGCCAGGTCCGTCAGGACGAGCGCCTCAAGAGCCTTCCCGTGCTGATGGTCACCGCTGAAGCCAAGCGTGAGCAGATCATCGAAGCTGCACAGGCC GGGGTAAACGGTTACGTGGTCAAGCCATTCACGGCTCAAGCGCTGAAAGAGAAGATCGAAAAGATCTTTGAACGCGTCAATAGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGCATGCCGCGAGGGCGCTATGGATAACAATGATTCGATGGCCGACTTTGAGTCGACCCTGAAAAGACACGCGCAGGAACTCGTCACCAGCCTTGAAAAA GGTCGTTTCGGCGAAGCTGTGCAACTGATCCATGAGCTCAACCAGACACGCGACCGCGGCCTTTATCAGGAAGTGGGCAAGCTGACTCGTGAGCTGCACA GTGCAATCGTCAACTTCCAGATCGATCCGCACATGCCTCAGGCCGAGGAGGTATCGCAGATCACGGATGCCACCGAACGTCTGGGTTACGTCGTGCGGCT GACCGAAAATGCGGCCAACCGCACCATGGATCTGGTCGAGGAAAGCACGCCAGTCATGAACGGTCTGAGCGCCGACGCCAAGGCGTTGAGCGAAGACTGG GGGCGCTTCATGCGCCGCGAAATCGGTGCCGAGGAATTTCGCGATCTCGCCAAGCGGGTCGATGGTTTTCTGACGCGTACCGAGAAGGAGACTCACGAGG
Amino Acid Sequence
>transcriptional regulator
MDKNMKILIVDDFSTMRRIIKNLLRDLGFTNTSEADDGLTALPMLQSGAFDFLVTDWNMPGMSGIDLLRQVRQDERLKSLPVLMVTAEAKREQIIEAAQA GVNGYVVKPFTAQALKEKIEKIFERVNS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site