Pseudomonas viridiflava LMCA8, RT94_RS21985

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PANTHER	PTHR33121	CYCLIC DI-GMP PHOSPHODIESTERASE PDEF	-	-	240	714	0.0
SUPERFAMILY	SSF55073	Nucleotide cyclase	IPR029787	Nucleotide cyclase	295	452	3.4E-50
SMART	SM00267	duf1_3	IPR000160	GGDEF domain	279	450	1.8E-62
SMART	SM00052	duf2_2	IPR001633	EAL domain	460	707	5.2E-106
Pfam	PF00990	Diguanylate cyclase, GGDEF domain	IPR000160	GGDEF domain	290	446	1.2E-48
SUPERFAMILY	SSF141868	EAL domain-like	IPR035919	EAL domain superfamily	466	715	9.42E-88
Gene3D	G3DSA:3.30.70.270	-	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	279	453	1.3E-57
Pfam	PF03707	Bacterial signalling protein N terminal repeat	IPR005330	MHYT domain	134	178	2.4E-12
Pfam	PF00563	EAL domain	IPR001633	EAL domain	466	702	4.9E-75
Gene3D	G3DSA:3.20.20.450	EAL domain	IPR035919	EAL domain superfamily	461	719	1.4E-97
CDD	cd01948	EAL	IPR001633	EAL domain	469	707	3.93186E-109
FunFam	G3DSA:3.30.70.270:FF:000001	Diguanylate cyclase domain protein	-	-	285	451	7.3E-47
CDD	cd01949	GGDEF	IPR000160	GGDEF domain	291	447	8.0855E-64
Pfam	PF03707	Bacterial signalling protein N terminal repeat	IPR005330	MHYT domain	73	128	2.9E-13
NCBIfam	TIGR00254	JCVI: diguanylate cyclase (GGDEF) domain	IPR000160	GGDEF domain	286	449	2.1E-47

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.