Pseudomonas viridiflava LMCA8, RT94_RS21615

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas viridiflava strain LMCA8 contig_48, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGAAGACAACCGTGAAAACTACGAACTGGCTGAAGCCATGCTGCGCCGTGCCGCTTTGGATGACGCGTCGGGCGAAGCGGAGTTCTATCAGGCCGTTCT GCTGATACGCCAGCAGGCCGACCACCAACAGATCATCGATCTGCTGCAGACTGCCGCTGGACACAAGCACCCGCTGGCCATCGCCCTGCTCTCCCAGCAA CTGAGCATCAGCGATCCGAAACGCTCCGAGCACTACCGCAACGAGTACGCGGAACTGGATGTTGCCAAGAGCGGCTACCCGTCTTTCGAACAGGCACTGG TGGTGATTCGCGGGCTGGTCATTCCCTCTGCACAGGCGACTGCGTCCAACTGACACACGACGAATCGACGAACGGCGCCCTGCGCCACGATTTCGACGGT ATCCTTGCGAGGCTCTAGCACGCGGCTTGTGTCGGGCTTCCGGGCCATTTCTCGATACGCCATTCCTGACCACACTCCTCGACACACTAAGGAGTGAGCC
DNA Sequence for Gene
>RT94_RS21615
ATGCTCAGCCATCGCTTACATGCGTTGACCTTCAGCGCCCTGTTCATCAGTCAGTCCATTTCTGCCCAGGTTCTGGAGCGGGATCTGGGTGATTTCGACC TGAAGCTGGCTACGACCCCCACGCGCAGCATGGCGCAGGGCCTGGTCACACCCAGTGGCGGCTCAGGCTCGTTTCATGGCGGTATGGACCTGACTCACGA CAGCGGTTTCTACTTCGGGCAGTGGGCACCCAACATGGGGTTCACACCCGACAGCGCGCTGGAAGTCGATTCCTACATGGGCTTCAAGAAACCCTTCGAC AATACGCTGGGCTACGAGCTGGGCATGATTCGCTACAGCTACCCGGACACCAGCCAGATCGACAGCCACGAGTTCTATGCCGGATTGCGGATGCTCGACA GTCGGGTGGGCGCCGCCTTCAGCAACGATGTGGGCTCGCGTGACAGCACGGTGTTCATCGATCTGGGTGCCATCGAGCGGCTCGGCATCGGCGTTCGAAT GCAGTACGCCAACCATCAGTTCGACACGCCGCAGACCTCTGACGACGGCGGACAGATCAGCGGCTTCAATGACTGGTCCCTGAATCTCTCGCGTCCCTGG CTGGGCATCGACATGAACCTGATCTACAGCGGGTCGAGCCTCAGCGGCGGCGATTGCAGCGTGTACAGCGGCCACAATGCGCGTTGCGACGGCACCTTCA CCCTCAAGGCCGTGCGTTCGTTTTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TACCGCATCCCGGTTGAACCCCTTGGCGCTACACTCCTCTACTGCACAGCATCCATGCAGGTCAGTGCCCCCGAGGAGCGTTCATGCAGTCTCTGTTCAA AGCCTTCATTACGATGTTGATGGCCGTGTCGCTGCTTGCCGGGTGCAATCAGGTAGGTCTGGCTTATCGCAATCTCGATGTGATCATTCCATGGACGCTC AGCGACTATCTGGACATGAACTCCGCTCAGAAAGACTGGCTCAACGTGCGCCTCAAGCAGCACCTGAGCTGGCATTGCAGCACCCAGCTGCCGGAGTACC TGACCTGGCTGGACAAGCTGGAAGAGATGGTGAAAAACGATCAGGTCACCTACGAGGGTCTGGAAGCACGCACCCGTGAGGCCAAGGACGCCATCGCCAA GATTTCTCGCGAGATCACACCGTCGGCCGTCGAGCTGCTGAGCCGCTTCGATGACAAGCAGGTCGAGGAAATGCAGAACGCCTTTGCCAAGGACCAGCGC
Amino Acid Sequence
>hypothetical protein
MLSHRLHALTFSALFISQSISAQVLERDLGDFDLKLATTPTRSMAQGLVTPSGGSGSFHGGMDLTHDSGFYFGQWAPNMGFTPDSALEVDSYMGFKKPFD NTLGYELGMIRYSYPDTSQIDSHEFYAGLRMLDSRVGAAFSNDVGSRDSTVFIDLGAIERLGIGVRMQYANHQFDTPQTSDDGGQISGFNDWSLNLSRPW LGIDMNLIYSGSSLSGGDCSVYSGHNARCDGTFTLKAVRSFF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site