Pseudomonas viridiflava LMCA8, RT94_RS21375

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas viridiflava strain LMCA8 contig_48, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGTCTGGACCTGATTCGTCAGTTGCGCACCCTGGGCAAGTCTTTTCCGATCCTGATCCTGACCGCGCGCGGTAACTGGCAGGACAAGGTCGAAGGTCTGG CTGCCGGTGCCGACGACTACGTGGTCAAACCGTTTCAGTTCGAAGAGCTGGATGCGCGGCTCAACGCCTTGCTGCGTCGTTCAAGCGGTTTCATTCAGTC CACCATCACTGCCGGGCCGCTACTGCTGGACCTCAACCGCAAACAGGCGGCGCTGTCCGAGCAGCCGCTGGCGCTGACGGCCTACGAATACCGGATTCTT GAGTACCTGATGCTTCATCATCAGCAGGTGGTGCCCAAAGAGCGATTGATGGAACAGCTGTACCCCGACGATGACGAGCGCGATCCGAACGTGATCGAAG TGCTGGTGGGGCGTCTGCGCCGCAAACTGGACAGCAACATGGCCTTCAAACCCATCGAAACCGTACGCGGCATGGGCTACCTGTTCACTGAGCGCTGTAC
DNA Sequence for Gene
>RT94_RS21375
GTGATTCGTTCGCTTCGCCTGCGCCTGATGCTGGGCGCTGTGACGCTGGCGATCATCTTCATGCTGCTGATGCTGCCTGCGTTGCAGAGCGGCTTCAGCC TGGCGTTGCGCGGTGCGATCGAGCAGCGGCTGGCGTCGGACGTGACCACGATGATTTCTGCGGCGCGTGTCGAGGATGATCATCTGTTGATGCCTTCGGT GCTGCCGGGCGAGCAGTTCAACCTGCCGGGCAGCCGCCTGATGGGCTACATCTATAACCGTCAGGGGCAGATGGTCTGGCGTTCGCTGTCCACCGAAGAC CTGGACATCGACTACCACCCCAACTATGACGGGCAGGGCAGTCAGTTCACCAAGATCAAGGAAATCAACGGCGACGAGTATTTCGTCTACGACGTCGAGA TTCGCCTGCTGGGTGGCCGCAATGCCGCTTTCAGTATCGTCGCTGTGCAGCCACTGCGCGGTTATCAGGAAACCGTCAACAATTTGCGTCAGAAGCTCTA TCTGGGGTTCGGCGCGGCCTTGCTGGTGTTGCTTGGATTGTTGTGGGGCGGCCTGACCTGGGGCTTGCGTGCCCTGAGGGGACTGAGTCACGAGCTTGAT CAGGTGGAAGCCGGCGAGCGCGACAGCCTGAGCGAAAAACACCCTAGTGAACTGCTGCGCCTGACCGATTCGCTGAACCGCCTGTTGCGCAGCGAACGCG AGCAACGGGCACGCTATCGCGATTCCCTGGGCGATCTGGCCCACAGCCTGAAAACCCCGTTGGCGGTCTTGCAGGGGGTCAGTGAAAACATTGCCAAACG TCCCGAAGACGTCGAGCAGGCCCGCGTGCTGCAATCGCAGATCGAGCGCATGAGCCAGCAAATAGGCTATCAACTGCAGCGCGCCAGCCTGCGCAAGAGC GGGCTGGTGCGTCATCACGTGATGCTGCGGCCGGTGATCGAAAGCCTGTGCAACACGCTGGACAAGGTGTACCGCGACAAGCGGGTCAAGGCCACGCTGG ACCTGCCCCAGGATTGTCAGGTGCACATGGAGGAAGGCGCACTGCTGGAAATGCTCGGCAACCTGTTGGAAAACGCCTACCGACTGTGCCTGAGTGAAGT GCGCGTCAGCTTTAGCGCATCGGCGTCCGGCGACGAGCTGTGCATCGAAGATGACGGCCCCGGCGTCCCGCAGTACCAGCGGGCTCGCATCCTCGAGCGC GGCGAACGTCTCGATCGCCAGAATCCGGGGCAGGGCATCGGCCTGGCCGTGGTCAAGGACATCATCGAAAGCTACAGCGCACAACTCACGCTGGACGATT CGCCTCTGGGCGGCGCAGCGTTCAGGATTCACTTCATGGCCGATTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTGTGGGGCTGAATGTGACGCTCTGCGTCACGGGCAGGTGCGCAATACCAACCTGCGGAAGGCGCCAACACGTCTTCGACGTAGCGCTGTCGCGCAGCAA ACTAGGTGGGAGCGGACTTGTCCGCGAATGCAGTATTTCAGCCACCGCATATGCGCCGGATGTACTGGCCTTTTCGCGGACAAGTCCGCTCCCACAAAAT CCAGTTTCTTCAGTGGTTTACAGGTTGTTTGATAAGAGGCGGCT
Amino Acid Sequence
>histidine kinase
MIRSLRLRLMLGAVTLAIIFMLLMLPALQSGFSLALRGAIEQRLASDVTTMISAARVEDDHLLMPSVLPGEQFNLPGSRLMGYIYNRQGQMVWRSLSTED LDIDYHPNYDGQGSQFTKIKEINGDEYFVYDVEIRLLGGRNAAFSIVAVQPLRGYQETVNNLRQKLYLGFGAALLVLLGLLWGGLTWGLRALRGLSHELD QVEAGERDSLSEKHPSELLRLTDSLNRLLRSEREQRARYRDSLGDLAHSLKTPLAVLQGVSENIAKRPEDVEQARVLQSQIERMSQQIGYQLQRASLRKS GLVRHHVMLRPVIESLCNTLDKVYRDKRVKATLDLPQDCQVHMEEGALLEMLGNLLENAYRLCLSEVRVSFSASASGDELCIEDDGPGVPQYQRARILER GERLDRQNPGQGIGLAVVKDIIESYSAQLTLDDSPLGGAAFRIHFMAD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site