Pseudomonas viridiflava LMCA8, RT94_RS21225

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas viridiflava strain LMCA8 contig_46, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCCTGACTGCCCTGTGCATCCAGCACCGAGTAGAAGCCCTTGCCGCGCCACGCGTCGGTGTCGCGAGCGTCATAGAACAGACGGGTCGGCGCGGCGGCCT CGGTGCGCTCACCCTGATAGACCGGTATCTTGCTGGCGCCGCGACTGACGCCCTCGCCACTGCCCAGATTCAGCTGACAAGGCGCGTCGTTGCACGCATG ACAAGCCACGCACTTTTCGGTGAGGATCGGTTGAATATCCCGCACGTAGGAAATGGCAGGCGACGAGACCGGAGGCGGTGTCTGGGCCTGAAGCACGCAG CAGGAAAAGAGCAGGACAATGCCTGCCAGCAAGCGATGCGGCATGGAGACCGGGCTCTGAGATTAAAAGCTCACGATTCTACAAGGCCGCACACCGCCTC AACATGAACGATTTTCATGCAAAAGCCCCGACAACACCAAATCCGTTCCGGTTTGCTATTATCGCCTTCTTTAAGTATCGACCTTCTCAAGGTAGCCCTC
DNA Sequence for Gene
>RT94_RS21225
ATGTCTGACCGCAGCGCCCGCCATCAAGCCTTCATCAATGCTCTGAAACAGAGGATCCTGATCCTCGATGGCGGCATGGGCACGATGATCCAGAGCTACA GGCTTGAGGAGCAGGACTACCGTGGCAAGCGTTTTGCCGACTGGCCGAGCGACGTCAAGGGTAACAACGACCTGTTGATCCTGACCCGCCCGGACGTGAT CGGCGCCATCGAGAAGGAATACCTGGACGCCGGTGCCGACATTCTCGAGACCAACACCTTCAACGCCACTCAGGTATCCCAGGCCGATTACGGTATGGAA TCCATCGTTTATGAGCTGAACGTCGAAGGCGCTCGCCTGGCGCGCAAGGTCGCGGATGCCAAGACCCTTGAAACCCCGGACAAACCGCGCTTTGTCGCAG GCGTGCTCGGCCCGACCAGCCGGACCTGCTCGCTGTCGCCGGACGTCAACAACCCCGGCTACCGCAACGTCACCTTCGATGAATTGGTGGAAAACTACAC CGAAGCCACGCGCGGCCTGATCGAGGGCGGCGCGGACCTGATCCTGATCGAAACCATTTTCGACACCCTCAACGCCAAGGCCGCGATTTTCGCCGTGCAA GGCGTGTTCGAAGAACTGGGCTTCGAGCTGCCGATCATGATTTCCGGGACCATCACCGACGCGTCTGGCCGCACCTTGTCCGGCCAGACCACCGAAGCGT TCTGGAACTCCATCAGTCACGCCAAGCCGATCTCGGTGGGTTTGAACTGCGCACTGGGTGCAAGCGAACTGCGTCCTTATCTGCAGGAACTGGCCAACAA GGCCAACACCCATGTGTCCGCGCACCCGAACGCCGGTCTTCCCAATGCCTTCGGTGAATACGACGAGCTGCCGAGCCAGACTGCAAAAATCATCGAGGAA TTCGCCGAAAGCGGGTTCCTGAACATCGTCGGCGGCTGCTGCGGCACCACGCCCGCACACATCAAGGCCATCGCCCAAGCCGTTTCCGGCTATGCGCCGC GTCAGATCCCGGACATCCCCAAGGCCTGTCGCCTGTCGGGGCTCGAGCCGTTCACCATCGATCGCCAGTCGCTGTTCGTCAACGTCGGCGAGCGCACCAA CATCACCGGTTCCGCCCGCTTCGCCCGCCTGATCCGTGAAGACAACTACACCGAAGCACTGGAAGTCGCCCTGCAGCAGGTCGAGGCCGGTGCGCAGGTG ATCGACATCAACATGGACGAAGGGATGCTGGACTCGAAGAAGGCGATGGTGACCTTCCTCAACCTGATCGCAGGCGAACCGGACATTTCCCGTGTGCCGA TCATGATCGATTCCTCGAAATGGGAAGTGATCGAAGCGGGCCTGAAATGCATCCAGGGCAAGGGCATCGTCAACTCCATCAGCATGAAGGAAGGCGTCGA GCAGTTCATTCACCACGCCAGACTCTGCAAGCGTTACGGCGCGGCGGTAGTGGTCATGGCCTTCGACGAACAGGGCCAGGCCGACACCGAGGCGCGCAAG AAGGAAATCTGCAAACGCTCTTACGACATTCTGGTCAATGAAGTCGGCTTCCCGCCGGAAGACATCATCTTCGACCCGAACATCTTCGCCATTGCCACCG GCATCGAAGAGCACAACAACTACGCCGTAGACTTCATCAACGCCTGCGCCTACATCCGCGACGAGCTACCGTATGCGCTGACCTCCGGCGGTGTGTCCAA CGTATCGTTCTCGTTCCGGGGCAACAACCCGGTGCGCGAGGCTATCCACTCGGTTTTCCTGCTGCACGCCATCCGCAACGGCCTGAGCATGGGTATCGTC AACGCCGGCCAGCTGGAAATCTACGACCAGATCCCGGCGGAACTGCGCGACTGCGTGGAGGATGTGGTGCTCAACCGCAACCCCGAAGGCACCGATGCGT TGCTGGCGATTGCCGACAAGTTCAAGGGCGATGGCAGCGTCAAGGAAGCCGAAACCGAGGAATGGCGCAGCTGGCCCGTCAATCAGCGCCTGGAACACGC GCTGGTCAAGGGCATCACTACCCACATAGTCGAGGACACCGAAGAGTCGCGCCAGTCGTTCAACCGCCCTATCGAAGTGATCGAAGGCCCGCTGATGTCA GGCATGAACGTGGTCGGCGACCTGTTCGGCTCCGGCAAGATGTTCCTGCCCCAGGTGGTCAAATCCGCCCGCGTGATGAAACAGGCCGTGGCGCACCTGA TCCCCTTCATCGAGCTGGAAAAAGGCGATAAACCGGAGGCCAAGGGCAAGATCCTGATGGCTACGGTCAAAGGCGACGTACACGACATCGGCAAGAACAT CGTCGGCGTGGTGCTGGGCTGTAACGGCTATGACATCGTCGATCTGGGCGTGATGGTGCCTGCGGAGAAAATCCTGCAAGTGGCCCGCGAAGAAAAGTGC GACATCATCGGCCTGTCCGGCCTGATCACGCCTTCGCTGGACGAAATGGTGCATGTCGCCCGGGAAATGCAGCGTCAGGACTTCCACCTGCCACTGATGA TCGGTGGCGCAACCACGTCCAAGGCGCACACTGCGGTCAAGATCGAACCCAAGTACAGCAATGACGCAGTCATCTATGTGACCGACGCGTCGCGTGCTGT GGGCGTTGCTACTCAACTGCTGTCCAAGGAGTTGAAGCCCGCCTTCATCGAGAAGACGCGCCTGGAATACATTGAAGTACGCGAGCGCACCTCGGCACGC AGTTCGCGCACCGAGCGCCTGAGCTACGGGGCTGCCGTGGCGAAAAAGCCGCAGTTCGACTGGGAACACTACACCCCTGCCCGGCCGACCTTCACCGGCA CCCGGGTACTGAACGACATCGACCTGAACGTGCTCGCCGACTATATCGACTGGACGCCGTTCTTCATCTCCTGGGATCTGGCCGGCAAATACCCGCGCAT CCTGACCGATGAAGTGGTTGGCGAGGCCGCCACCGCGCTGTTCGCCGATGCTCAGCAGATGCTGCGCAAGCTGATCGACGAAAAACTGATCAGCGCCCGT GCCGTGTTCGGCTTCTGGCCTGCCAATCAGGTTGATCATGATGATCTGGAAGTCTATGGCGAAGACGGCAAGCCGCTGGCAAAACTGCATCACCTGCGCC AGCAGACCATCAAGCCCGACGGCAAGCCCAACTACTCGCTCGCCGACTTCGTGGCGCCGAAGAGCAGCGGCCTGACCGACTACATCGGTGGCTTCATCAC CACCGCAGGCATCGGTGCCGAGGAAGTGGCCAAGGCTTATCAGGACAATGGCGACGACTACAACTCGATCATGGTCAAGGCCCTCGCCGACCGTCTGGCC GAAGCGTGTGCCGAGTGGCTGCACCAGCAGGTGCGCAAGGATTACTGGGGTTACGCAAAGGACGAAGCGCTGGACAACGAAGCCCTTATCAAAGAGCAGT ACATGGGCATTCGCCCGGCGCCAGGCTATCCGGCGTGCCCGGATCACACCGAAAAAGGTACGCTGTTCGCGTTGCTGGACCCGCTGCCGGAAGGCACGCC CGAGCACACCCCTGGCCGCAGCGGCGTGTTCCTGACCGAACACTACGCCATGTTCCCGGCGGCGGCGGTCAGCGGCTGGTACTTTGCCCACCCTCAGGCG CAGTACTTCGCGGTCGGCAAGATCGACAAGGATCAGATCGAGAGCTACACCGCCCGCAAAGGTCAGGACCTCAGCGTGACCGAGCGCTGGCTGGCACCGA ACCTGGGTTACGACGAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCGCAGCAATGTCAGACCGTCGCCGGGCACGAGTCGTTATACACAAGTCCGCCTCGACACTGATCGTGCCCATCGCTCCGCGTGGGCATGCCTCCCGTG ACGCTCCGCGTCACAAATGGCACAGACTCAGGATTCAGTGAGCCGAGCACATGACGTGGATAACGCTGGAGCTTGGGCACATATCTGCGCCACATTCGAG AGCGGACGCGGAGCGTCCTGGGAGGCATTCCCACGCGGAGCGTAGGAACGATCAGCGTGATCTCAAGCACGCCGATCATGCCCATGCTTGTGCTCAGCGT TATACCCGAGTCTTGCTGCGATCACGGACGGTGGGAGGTGCCACCACGTCTTCGACGTAGAGCTGTCGCGCAGCAAACACGGACCGTAGGAGCGCGCTTG CCCGCGATTGCGTCAGTTCAGTCGCTGGTTTTCTGTCCGTAAGATCCTATCGCGGGCAAGCGCGCTCCTACAAAAAATCGCATTCCTTCAGTGGGTTCTT
Amino Acid Sequence
>methionine synthase
MSDRSARHQAFINALKQRILILDGGMGTMIQSYRLEEQDYRGKRFADWPSDVKGNNDLLILTRPDVIGAIEKEYLDAGADILETNTFNATQVSQADYGME SIVYELNVEGARLARKVADAKTLETPDKPRFVAGVLGPTSRTCSLSPDVNNPGYRNVTFDELVENYTEATRGLIEGGADLILIETIFDTLNAKAAIFAVQ GVFEELGFELPIMISGTITDASGRTLSGQTTEAFWNSISHAKPISVGLNCALGASELRPYLQELANKANTHVSAHPNAGLPNAFGEYDELPSQTAKIIEE FAESGFLNIVGGCCGTTPAHIKAIAQAVSGYAPRQIPDIPKACRLSGLEPFTIDRQSLFVNVGERTNITGSARFARLIREDNYTEALEVALQQVEAGAQV IDINMDEGMLDSKKAMVTFLNLIAGEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFIHHARLCKRYGAAVVVMAFDEQGQADTEARK KEICKRSYDILVNEVGFPPEDIIFDPNIFAIATGIEEHNNYAVDFINACAYIRDELPYALTSGGVSNVSFSFRGNNPVREAIHSVFLLHAIRNGLSMGIV NAGQLEIYDQIPAELRDCVEDVVLNRNPEGTDALLAIADKFKGDGSVKEAETEEWRSWPVNQRLEHALVKGITTHIVEDTEESRQSFNRPIEVIEGPLMS GMNVVGDLFGSGKMFLPQVVKSARVMKQAVAHLIPFIELEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIVDLGVMVPAEKILQVAREEKC DIIGLSGLITPSLDEMVHVAREMQRQDFHLPLMIGGATTSKAHTAVKIEPKYSNDAVIYVTDASRAVGVATQLLSKELKPAFIEKTRLEYIEVRERTSAR SSRTERLSYGAAVAKKPQFDWEHYTPARPTFTGTRVLNDIDLNVLADYIDWTPFFISWDLAGKYPRILTDEVVGEAATALFADAQQMLRKLIDEKLISAR AVFGFWPANQVDHDDLEVYGEDGKPLAKLHHLRQQTIKPDGKPNYSLADFVAPKSSGLTDYIGGFITTAGIGAEEVAKAYQDNGDDYNSIMVKALADRLA EACAEWLHQQVRKDYWGYAKDEALDNEALIKEQYMGIRPAPGYPACPDHTEKGTLFALLDPLPEGTPEHTPGRSGVFLTEHYAMFPAAAVSGWYFAHPQA QYFAVGKIDKDQIESYTARKGQDLSVTERWLAPNLGYDE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site