Pseudomonas viridiflava LMCA8, RT94_RS18715

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas viridiflava strain LMCA8 contig_40, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTCCGGCAGCCGGCGAAACCCGTGGCAACCTCGCCGCTGGCGGCCGTGGTGAAGCGCGTCCGCTGAGCGACAAGGACCGCTGGATCGCCGAACAGATCGG CCCGACCCTGCGCGAGAAAGGTCTGCTGTTCGTGGGCCTGGACGTGATCGGTGAGCACCTGACCGAAATCAACGTGACCAGCCCGACCTGCATTCGCGAA ATCGACAACGCCTTCGGCACCGACATCGGCGGCCTGCTGATGGATGCGATCGAGAAGAAGCTGCAGGCGCGTGCTGCCTGATTGTCGGGTATACGTTGAA ATGATCCCGAATTGTGGAAAGCTCGCTGCGAAGTCTTTGACGTAGCGGGGCCTTCCACATCGAGGACTGCCGGGCATACCGGGCATTGAACGCCCTTCGT CCGATCCGGACCGGAGCTTCAAGCCACATTGCGTTATCATGCGTCACCTGTAACACGACACGGACTTTGACATGCAGGCTGACGAGATGCTGAACCGCCC
DNA Sequence for Gene
>RT94_RS18715
ATGACATCGATGGCCAGAAACGACCTTCCCCTGGAACTCGCCAACGTCGGCGTGCGTCCGGCCGATCGTCTGGGCTTCACCATGATGATCGCGGCGTTGA TCCATCTGGCGATCATCCTTGGCGTGGGCTTTACCTACGTGAAGCCGGAGCAGATTTCACAGACGCTGGAAATCACCCTCGCCACGTTCAAGAGCGAAGA AAAGCCCAAACAGGCTGACTTCCTCGCTCAGGACGACCAGCAGGGCAGCGGTACGCTGGACAAGGCTGAAACGCTCAAGACCACCGAAGTCGCGCCCTAC CAGGACACCAAGGTCAACAAGGTCACGCCGCCCCCGGCCAGCAAGCCGGTGGTCAAGCAGGAAGCGCCCAAGACTGCGGTCGCCACCACGGCACCCAGCC CTCAGAAAACCGTCGCCAAGCGCGAAGAGGTCAAACCCGACCCAGCGGTCAAGGCCGCGCCGACCTTCGACAGCGCCGAACTGAGCAACGAAATCGCCAG CCTGGAAGCCGAACTGTCCGCCGAACAGCAGTTGTACGCCAAACGCCCAAAGATCCATCGCCTGAACGCGGCCTCGACCATGCGCGACAAGGGCGCCTGG TACAAGGATGACTGGCGCAAGAAAGTCGAGCGAGTCGGCAACCTCAACTACCCTGAAGAGGCTCGCCGCAAGCAGATCTACGGAAACTTGCGACTGCTGG TCTCGATCAATCGCGACGGTTCGCTATACGAAGTGCTGGTGCTCGAATCCTCCGGACAGCCGCTGCTGGATCAGGCAGCGCAGCGAATCGTGAGGCTTGC AGCGCCATTTGCGCCGTTCACCGGCGATCTGGCTGACATTGATCGACTCGAGATCATTCGCACCTGGAAATTCGCCCGCGGGGACAAGCTTTCCAGCAAC TGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGCTTTTTTGCCAATACTGCCAGCGCACGCACAACTGACAGTTGTCAGGCACGCGGCTCAGCGCCACACTAGGGCTCATGAAAAAAGTCTCTCCGAGTTA CCTCAAGCATCAGTTCTTGATCGCCATGCCGCACATGCACGACGAGAACTTCTCGCAGACCTTGACTTACGTTGTCGAGCACAACGCCAATGGCGCAATG GGACTGGTGATCAACCGCCCGCAAAGCCTGACCCTGGCCGATGTGCTCGAACAATTGCGACCGGAGCTGCCTGCACCGGTGCGCTGCCAGCAGATCCCCA TCCATTCCGGTGGCCCGGTGCAGACCGATCGCGGCTTCGTGCTGCATCCCAGCGGCCAGGTGTTTCAGGCGACGGTCGATCTGCCGGGTGGTATCTCGCT TTCCACGTCCCAGGATGTGCTGTTCTCGATTGCTGACGGCTACGGCCCTGATCAAAATGTGATCACACTCGGCTACGCCGGATGGGACGCGGGTCAGCTC
Amino Acid Sequence
>hypothetical protein
MTSMARNDLPLELANVGVRPADRLGFTMMIAALIHLAIILGVGFTYVKPEQISQTLEITLATFKSEEKPKQADFLAQDDQQGSGTLDKAETLKTTEVAPY QDTKVNKVTPPPASKPVVKQEAPKTAVATTAPSPQKTVAKREEVKPDPAVKAAPTFDSAELSNEIASLEAELSAEQQLYAKRPKIHRLNAASTMRDKGAW YKDDWRKKVERVGNLNYPEEARRKQIYGNLRLLVSINRDGSLYEVLVLESSGQPLLDQAAQRIVRLAAPFAPFTGDLADIDRLEIIRTWKFARGDKLSSN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site