Strain | Pseudomonas viridiflava strain LMCA8 contig_38, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCTGCTGCGCCCACAACTGCTGGACAGTCAGGTGTTGATCAACGCCTGGAGCAGCCCGAATCCGCACAGTGCCCGCTGTTTTTCGGTGCGCAAGAAACT GCTGTTGAACTGCGGATCTGAAGCTTATGTGCAAGCTCAGGCGCTGTTTCTTTATCCGGCCGACTGGATCGCGGCGAACACCACGCGGCTTGCCAGCGAC GAGGCGCACGCGCTGGCGCACTTCCCGGACACGGACAACCTGCTGCGGCGCATTCATGCGCTGGAAAGCTTCGATATCGACGCGAACCTTGCGGACATTC GCACACCGACGCTGCTGATCGCCAATCGCGACGACATGCTGGTGCCATGGCAGCGTTCAAAGCATCTGGCCGACACGCTCCCCGACGCCAGGCTGGTGCT TCTGGAATACGGCGGTCACGCCTCCAACATCACTGACCCACATCCCTTTCATCGAGCCCTGCTCGACTTTCTCAGCGCCCAGACCTGAAGGACCGTTGCC
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DNA Sequence for Gene |
>RT94_RS18355
ATGCACACTCAATCAGAGCTACGCCCAACCGAAGCCCCTGCAGTGACCCAACTTCAATTTCGCGACGCGATGTCCAGCCTCGCTGCCGCAGTCAACGTGA TCACCACCGATGGCCCGCACGGCAGGGCCGGATTCACCGCGACCGCAGTCTGCAGCGTGACCGACCAGCCACCGACGCTGCTGGTCTGCATCAACCGCAG TGCATCGGTGTACGAGGCCTTCGTGGGCAATGGCACGTTGTGCGTGAACACGCTGGGTCACGAGCAGCAGGCGCTGTCCAACCTGTTCGGCGGCAAGAAC TCTCAGGCCGAGCGCTTCGCTGGCGGCCAATGGCTGGAAGGTCTGACCGGCGCACCGTTACTCGATGGCGCGAAGCTGGCATTGGACTGCCGAATCAGCC AGTCAGTGAGTGTCGGCACCCACGACATTCTGTTCTGCGAGGTGCAGGACATCCGGCATGAAAGCCAATCGGACGCGCTGGTGTATTTCGGACGTCAATA TCATCCGCTGCCCGGTGTCCTGCCGACGATTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AAGAACGGTCGGCGCTCTCGGCCGCCGACCACTCTGTCACGGTCATTGATTGTTTTTATCAAGCGCTGGAGGCAAAACCCATTAAAGCTACAACCTACTG ATTTAAAACAATAAAAACAGAATCAGCAACTTATTGACGTCAGTTAAATACACAAGGTCTTTTCCTGAACTGCTGCTTATACTGGCGTTACGAGATCAGG ATGATCCTTGCAGTCAATAAGGTGAAGTCATGTCGATCCATCGCCAGGTCAGACAATCCAAAGGGGCCGTTGCGCCCTGCTCACGCAAAGGCTGCTCCAT CGAGCCAGGTCTGGGTGGCTGGGCATGCTGAAGAAAATCCCCGTTTCCGAACTCAGCCTTGGCATGCACATCCACAAGTTCTGTCGCCCCTGGAACAGTG ATCCTTTCTGGGTCGCTCACGTCGAAACCGTTCTTCACGATACCGATGTGCTCAAACGCATTCAGTCTTCCGATACGCTCGAGGTCTGGATCGACACGCA
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Amino Acid Sequence |
>FMN reductase
MHTQSELRPTEAPAVTQLQFRDAMSSLAAAVNVITTDGPHGRAGFTATAVCSVTDQPPTLLVCINRSASVYEAFVGNGTLCVNTLGHEQQALSNLFGGKN SQAERFAGGQWLEGLTGAPLLDGAKLALDCRISQSVSVGTHDILFCEVQDIRHESQSDALVYFGRQYHPLPGVLPTI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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