Pseudomonas viridiflava LMCA8, RT94_RS16815

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas viridiflava strain LMCA8 contig_34, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCCCTCATAGCCAGATCGTTGGAGCGTTGTATCGCGATCACCGTAGCTGGCTGCTGGGCTGGCTTCGGCGCAACGTTGCCTGCCCGCAGCGTGCGCAGG ATCTGAGCCAGGACACCTTCGTGCGCTTGCTGGGGCGTGATGAACTGGAGGCACCCAGAGAGCCGCGGGCGTTTCTGGCGACGGTTGCGAAGGGCCTGAT GTTCGATCATTTCCGCCGTGCTGCGCTGGAACAGGCGTATCTGTGCGAACTGATGCAAGTCCCGGAAGCCGAACAACCCTCTCCCGAAGAGCAATTGCTG ATCCTGGAAGACCTGAAAACGATCGATCGCCTGCTGGCCACCTTGTCGAGCAAGGCGCGTGCGGCCTTTTTGTATAGCCGGCTGGATGGCATGAGCCACG GCGAAATTGCCGAAAGGCTGGGTGTCTCGGTGTCGCGGGTCAGGCAGTATCTGGCTCAGGCAATGCGTCAGTGCTATGCAGCGCTGTATGGCACGCCGAC
DNA Sequence for Gene
>RT94_RS16815
ATGAACGCCAGTCCGGTATCGGCGCGCGTGCTGGATGCAGCCATCGAGTGGCAACTGAATCTGGATTCGACCAGCGGCAACGAGGCCGAGCGTGCCGAGT TCGCCCGCTGGCTGGCGGCTGACGAAGAACACGCCCGTGCCTGGAGCCAGCTGGGCATGCTCAATCAGCGTTTTGCCGTGCCGTCAGGTCCGGCGCGCAA GGCCTTGCAACAATCGCCGGGCACCCTGCGGCGCAGTCTGCGCAAGCTCGGTGGCGGTCTGGCCGGGGTGTTTCTGGCCTGCGGTCTGGCGCTGTTTACC GCTGACCGTTACCTCGCGCTCGACTACTGGCTCGCCGATCAGCGCACCGCGACCGGCGAACAGCGCGATGTGCGTCTGGCCGACAACACCGTCATTCGCC TCAATACCCACAGCGCAATCGATGTGCGCTTCGATGCGAATCAGCGCCGCGTGATCCTGCAGGACGGCGAGATACTGGTGCAGACCGGTGATCATGACGA TCCCCGGCCCTTCATCGTGGAAACCCCGGACGGCAATATGCGCGCGCTCGGCACGCGTTTTCTGGTCAGGCGCGACGCCGACGGCACGCTGCTCAGCGTG CTGCAATCGGCTGTCGCCGCCAACGCGCGTGATCTTCCTCAGGAGCAGATCCTGCGCGAAGGCCAGCAGATCCGCCTGACCCGTGACGGCCTGGGTCCGC TGCTCGCCCTGCCGATGGGGGCAGACGCGTGGACCCGCGGCATGCTGGTAGTGGATAACGCTCGCCTGCAGGACATGCTGGCCGAGCTGGGTCGTTATCG ACAGGGGCATCTGGGCGTCGACCCACAGGTGGCCGACCTGCGCATCACCGGCAGTTTTCCGCTGACCGATACCGACCTGGCGCTCAAGGCATTGCTGCCT GCGTTGCCGGTGCGGATCGAAGAACATACGCCCTGGTGGGTCACGGTACTGCCGAGGAATGACACCGCTGCGGCAAAACTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACACAGCGGCGAGCCTCGACCTTGCTCTGTGCTGACACTTTTCAGGTTTCATGCGGCTCAGCCTTAACGAGCCCTGCCCTTTCGCCTGTGGATACCCCA TGAAAAGCCAAACCGTGCGTCGCTGGTCTGTCGTCCATACCTGGAGCAGCCTGATCTGCACACTGTTCCTGCTGATGCTGGCAATCACCGGTCTACCGCT GATCTTTCACCACGAGATCGATCACTTGCTGGGCGATGCGCCGCAGTACAGGGAGATGCCTGCGGACACGCCTCACTTGAACCTGGAGCAGCTGGCGAAG GCTGCCGAAGCGCATCGTCCCGGTGAGGTGATGCAGTATTTCGGCTGGGATGACGAAGACCCCAATGGCGTGATGGCGATCACGGCAGCAACGGCCGGAA CCGAGCCCAACTCGTCCCACACCTTTGCGCTGGATGCGCGCACTGGCGAAGCGCTGGAAATGCCGTCGGCCAACGGCGGCTTCATGATGGTCATGCTGCG
Amino Acid Sequence
>amino acid ABC transporter substrate-binding protein
MNASPVSARVLDAAIEWQLNLDSTSGNEAERAEFARWLAADEEHARAWSQLGMLNQRFAVPSGPARKALQQSPGTLRRSLRKLGGGLAGVFLACGLALFT ADRYLALDYWLADQRTATGEQRDVRLADNTVIRLNTHSAIDVRFDANQRRVILQDGEILVQTGDHDDPRPFIVETPDGNMRALGTRFLVRRDADGTLLSV LQSAVAANARDLPQEQILREGQQIRLTRDGLGPLLALPMGADAWTRGMLVVDNARLQDMLAELGRYRQGHLGVDPQVADLRITGSFPLTDTDLALKALLP ALPVRIEEHTPWWVTVLPRNDTAAAKL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site