Pseudomonas viridiflava LMCA8, RT94_RS16300

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas viridiflava strain LMCA8 contig_34, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCAGACCGGGCAGTTCCTGGTCCTGACAAATTCCAGCCACAGGCCCTCGCCTGCCATCAATACGAACCCTGCCCCATCAGGTGGAGACGCGGCATGACG CTGCGCCTTTCATCTGCACCGACACAACCACAAGGAGTCACGGAATGAACGACATACTCGACCAGCTTCGCAAGGAATTCGCCACGCCGTGCCCATCGCT GAGTGCCGTGCGCGAGCGCTACTTCTCCCATCTGTCCAACGACCGCAACCTGCTGCGCAAGATCAACGCCGGGCGTATCGCCCTGAAGGTCAGCCGCACC GGCGGCACGCGCCAGGGACATCCCTTCGTCTACCTGCATGATCTGGCGAATTACCTTAACGATATCGTCACTGACAGGGCCGCATGATTTACGCCAGTGA TAGGCCAACCATTGGGCGGTAACTTTCGATAGCGCTGGCGGTCATGAAGAGGCTTGCTACGTTTCCTAGACAGAATAAAAAACAGGAAAGGATCTTTCTC
DNA Sequence for Gene
>RT94_RS16300
ATGATCACGATATCAAGGCGATGGCCCTTCGCGGCCTGTCTGCTCTCGCTGGCCTGTAGCACGGCAGTTGCCGCGCCTTACTCGACCATGGTGGTGTTCG GTGACAGTCTGGCCGATGCCGGGCAGTTTCCCGACACGGACGGACCTGCCGGTTCGACCCTGCGCTTCACCAACCGGGTCGGGCCGACCTATCAGGACGG CAGCGGCGAGGTTTACAACCTCAACTCGTCCACGCTTATCGGCAGAATGCTCAACGTTCCTGCTGGCGATCTGGCCGCTTCGACCTCACCCGTCAACGCT GCGCTGGGTCTGCCGGATGGTAACAACTGGGCGGTGGGCGGCTATCGAACCGACCAGGTCCTGGACTCGATCACCACGCAGTCCGACGCGGTGACGCCCA TCACCAGCGGATCGCAAACCGTCCTGCGCAGCCGTCCGGGCTATCTGCCCAGCAACGGGTTTCGTGCCGATCCGAACGCGCTTTATTACCTGACCGGAGG CGGCAACGATTTCCTGCAGGGCCGCGTACTGAGTTTCGGCGATGCCGAGGATGCCGCCGACCGTCTCGCCGACAGCGCGCAGGTGCTGCAGCAGGCGGGC GCACGCCACATCATGGTCTGGCTGCTGCCGGACATCGGCCAGACGCCTGCGTTGAGCGGCACGGTGCTGGAATCCTTGACGTCCAGGCTCAGCGCCCGAT TCAACGAGCAGCTGGTCAGCCGCCTTTCACAAATCGATGCGCAGATCATCCCGCTCAACGTGCCGCTGCTGATCAGCGAAACGCTGGCGCAGCCTGCGCG ATTTGGCTTCGATCCCAATGAAGACCTTGTCGGCACCTGTTTCAGCGGCGACAGCTGTGACGAAAGCGCCACCTTCGGACGCTCAGGCACAACACCTGAT CCGACCAAGCTGTTCTTCAACGACCGCGTTCACCCGACCGAAGCCGGGCAGCGTCTGCTGGCCGACTATGCGTATTCATTGTTGTCGGCCCCCTGGGAAA TCACCCTGCTGCCGGAAATGGCCAACAGCACCCTGCGTGCCCACCAGGACGAGCTGCACGCCCAATGGCTCAGCGACTTTGGCAATTGGCAGGCGGTCGG CCAGTGGCAAGGCATCCTCTCGGCAGGCGGTCAGAAACTGGACATCGACGCTCAGGACACCGCTGCAGATGCAGACGGCAAGGGCTACAACCTGACGATC GGCACCAGCTACCGTTTCGCCGAAAACTGGCGCACGGGTGTCGTTGCGGGCGCCTATCGACAGAACCTCGAGGCGGGACCGCGAGATTCGGACTACAAAC TCAACAGCTACATCGCCACCGCGTTTCTGCAGTATCAGGCCAACCACTGGTGGGGTGATCTGGCGGCCTCAGGCGGCAAACTGGATTACGAGAACGCCGA GCGCAAGTTCGCATTGGGCGTGAGCCAAGGTCAGGAGAAAGGCGATACCGACGGTGAAATGTGGGCTGTGAGCGCACGTGTCGGCTTCGACATCGCGGGT ACAAACAGTCGCTGGCACCTGTCGCCGTTCATCAGCGCGGACTATGCGCACATCGATGTGGACGGCTACTCAGAAGAAGGCGCTCGTTCGACGGCTCTGA CCTTCAGCGACCAGACGCGCAAATCCAAACGAGCAGGCGTGGGTTTGCAGGGCAAGTTCCAGGTCACGCCATCGACGCAGGTCTGGGGAGAAGTCGCGCG TGAACGGGAATTTGAAACCGATCAGCAGGACGTGACCCTGTCGCTCAACAGCGTGCCGTCCATCGACTTCACGCTGGACGGCTACACGCCGCAACGCAAC CTCAACCGCGCCACACTGGGCGTCAGTCAGAAACTCACCCAGGACCTCACGCTGCGCGCCAACTACAACTGGCGCAAGAACGATGACGTGACCCAGCAAG GGGCTAACGTGGCGCTGAGCCTGAACTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTGAAGGAATGGGACGCGAAGCGTCCCCGGATGCATGCGGAAGATGATCGTTCCCACGAGAGCGCTCATCGTTATACACAAGTCTGCCTCGACACTGATC GTGCCCATCGCTCCGCGTGGGCATGCATCCCGTGACGCTCCGCGTCACAAATGGCACAGATTGCGGATTAAGTGAGCCGAGCGCATGACGTGGATAACGC TCGAGCTTGACCACGCATCTTGCGCCACATTCAAGAGCGGACGCGGAGCGTCCTGGGAGGCATTCCCACGCAGAGCGTAGGAACGATCAGCATGACCTCA AGCACGCCGATCATGGCCCCTGCACCCAAGTCTTACTGCAACCACGGACTACTGTGGGAGGCGCCACCATGTCTTCGACGTAACGCTGTCGCGCAGCAAA CACCGGACTGTGGGAGGCGGCTTGCCGGCGATGCTTTTTCTGAAGCGACCTATCAGTGACTGAACTGACGCCATCGCCGGCAAGCCGCCTCCCACAGGGT
Amino Acid Sequence
>esterase
MITISRRWPFAACLLSLACSTAVAAPYSTMVVFGDSLADAGQFPDTDGPAGSTLRFTNRVGPTYQDGSGEVYNLNSSTLIGRMLNVPAGDLAASTSPVNA ALGLPDGNNWAVGGYRTDQVLDSITTQSDAVTPITSGSQTVLRSRPGYLPSNGFRADPNALYYLTGGGNDFLQGRVLSFGDAEDAADRLADSAQVLQQAG ARHIMVWLLPDIGQTPALSGTVLESLTSRLSARFNEQLVSRLSQIDAQIIPLNVPLLISETLAQPARFGFDPNEDLVGTCFSGDSCDESATFGRSGTTPD PTKLFFNDRVHPTEAGQRLLADYAYSLLSAPWEITLLPEMANSTLRAHQDELHAQWLSDFGNWQAVGQWQGILSAGGQKLDIDAQDTAADADGKGYNLTI GTSYRFAENWRTGVVAGAYRQNLEAGPRDSDYKLNSYIATAFLQYQANHWWGDLAASGGKLDYENAERKFALGVSQGQEKGDTDGEMWAVSARVGFDIAG TNSRWHLSPFISADYAHIDVDGYSEEGARSTALTFSDQTRKSKRAGVGLQGKFQVTPSTQVWGEVAREREFETDQQDVTLSLNSVPSIDFTLDGYTPQRN LNRATLGVSQKLTQDLTLRANYNWRKNDDVTQQGANVALSLNF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site