Pseudomonas viridiflava LMCA8, RT94_RS15100

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas viridiflava strain LMCA8 contig_31, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATTCGGCCTGACGCTGCTGGATGTCACGGCAATGGGACGCGCACCTCATCAGGGGTTTTTCGCAGCAGACAGTCCTGAAGACCGCGCCATCGTGCAGCAA GCGCTTAAAGCCGTCGGGCTGGAAGGCTATGAACAGCATCGTTTCGACACGCTGTCCGGCGGCGAAAAACAGCGTTGCCTGCTGGCCCGTGCACTGGTCC AGCAACCGCAATTGATGGTGCTGGACGAGCCGACCAACCACCTCGATCCGCGTCATCAGCTCGAACTGCTGGGGCTGGTCAGACAGCTCGGCGTGGCGAC GCTGGCCAGCATTCATGACCTGAACCTGGCGGCGGCATTCTGTGACCGGTTGTATGTGGTGCATCACGGTCGGCTGGTTGCTCAGGGCAAGCCCTGGGAC GTACTGACCCCGGACCTGCTGCTCAGCGTATTCGGCGCCAAGGCGCTGGTCGATTGTCATCCCCTGCGTGATTACCCACGCATCACCTGGATTCCCTGAA
DNA Sequence for Gene
>RT94_RS15100
ATGAAGCCTTTGTTGACCTGGCTGACCCTGGCCGCACTAACGATCAGCCCGATGGTGCACTCCCAAGCCACGAACTATCCGGTCACTGTGCAGAGCTGCG ACCGCTCGGTGACATTCAACGCTGCGCCGCAACGCGCGGTCAGCAACGACGTCAACCTCACCAAGATGATGGTCGCGCTGGGTCTGCAACCTCACATGGT GGGCTACAGCGGGATCACCGGATGGAACAAACCCGATCCCGCGCTGCTGCATGATCTGGGCACGCTGCCCGAGTTGTCCAGCAAATACCCGTCCGTGGAA AACCTGCTCAACGCCAACGCCGATTTCTATTTCGCCGGCTGGAACTACGGCATGCGGGTCGGCGGGGACGTCACGCCGCAGAGCCTCGCTACGCTGGGCA TCCAGACCTACGAGCTGACCGAATCCTGCGCGCAGATCATGCCTCGCGCCGAAGCGACGCTGGATGACGTGTACAACGATCTGCTCAATCTGGGTCGCAT ATTCAATGTGCAGGACCGGGCACAAGCATTAGTGGCCGACATGCAGAACCGGGTGAGCCGGGTCCATGAGCAACTGGCAGACAAAGCGCCTCCACGAGTC TTTCTGTACGACAGCGGCGAAGACCGGCCCATGACTGCCGGGCGTCTGGCCATTCCGCAAGCGCTGATCCGCGCAGCGGGCGGAAGCAATGTCATGGGCG ATGTCGCGGCCAGCTGGACTCACGTGAACTGGGAGTCGGTGGTGCAGAGCAATCCCGAAATCATCGTGATCGTCGACTATGGCGAAGTCAGCGCCGCACA GAAGCGGCAATTTCTGGAAAACAACCCGGCCCTGCAATCCGTCGATGCGGTTCGCAACAAACGCTACGTCGTGTTGCCCTACGTTGCCGTCACACCGGGA ATCGATAACGTCGCAGCCATCGAGACTCTGGCGGCGGCCTTTCACGACGTGGCGCGATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCTGTCGCAGTGGCTCACGGAACGGCGGAGCCGCTACACCGGTTTGCTGATCGCTCTCACAGTTGTGCTGCTGATCTCGTGCCTGGTGTCCGTCACCTT CGGCGCAGCGCGTGTGCCGTTGGAGCAGGTCATCGGCATCCTGACGCTCAAACTGTCAGGCGTCGGTCATGAGCCACACCTCTGGACGGCAGGACAAGAG ACCATCGTCTGGCTGATCCGTATGCCCCGTGTGTTGCTGGGCGCTCTGGCGGGCGCAGGTCTGGCGCTCATAGGCTGCGTGCTGCAAGCCGTGACCCGCA ATCCGCTGGCCGATCCGCATCTGTTGGGAGCCACTTCGGGCGCCACACTCGGTGCCGTGATTGTGGTCATGCACGTCGGCGAAATCCTCGGCATGCTGAC CTTGCCCCTCGCCGCGTTTGCAGGCTCGCTCGCCAGCCTGATCCTGGTGCTGTCGCTGTCCAGCCGCAACGGCCGCCTCGACAGCCAGCGCTTGCTGTTG
Amino Acid Sequence
>iron ABC transporter substrate-binding protein
MKPLLTWLTLAALTISPMVHSQATNYPVTVQSCDRSVTFNAAPQRAVSNDVNLTKMMVALGLQPHMVGYSGITGWNKPDPALLHDLGTLPELSSKYPSVE NLLNANADFYFAGWNYGMRVGGDVTPQSLATLGIQTYELTESCAQIMPRAEATLDDVYNDLLNLGRIFNVQDRAQALVADMQNRVSRVHEQLADKAPPRV FLYDSGEDRPMTAGRLAIPQALIRAAGGSNVMGDVAASWTHVNWESVVQSNPEIIVIVDYGEVSAAQKRQFLENNPALQSVDAVRNKRYVVLPYVAVTPG IDNVAAIETLAAAFHDVAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site