Pseudomonas viridiflava LMCA8, RT94_RS14575

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas viridiflava strain LMCA8 contig_29, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTGGTAACACGTTGCGGACACTGGTCATAGGGACAGTGGTATTCTTCACCGCGTTCAACCTGCTGGAGGCGTCTTTGCCGTCGCTGATCAGCAAAGTGTC ACCGGCTGGCGGAAAAGGGACGGCAATGGGGGTTTATTCCACCAGCCAGTTTCTCGGATCGGCCGCAGGTGGGATACTGGGCGGCTGGTTGTTCCAGCAC GGTGGGCTTGATGTGGTGTTCCTTGGTGGTGCAGCCATGGCCGCCGTCTGGCTTGCGTTTGCAATGACCATGCGTGAACCGCCTTACGTGACCAGCCTAC GTCTGCCGTTGTCGCCAGAGGCGCAGCGTGATGCAGGCCTGGCAGAGCGTTTAAAGTCCGTAACCGGCGTAACGGATGCAGTGGTGGTTGCCGAGGAGGC AGCCATCTATATCAAACTGGATACAAAATTATTGGATCGTGCCTCTCTCGAAAAGCTGATCAACCCAGCATCAGAAGCGTGCGAAGCCTAGGAGAACGTT
DNA Sequence for Gene
>RT94_RS14575
ATGGCCCGTGGGGTTAACAAAGTCATATTGGTCGGTACATGCGGCCAGGATCCCGAAGTTCGCTACTTGCCTAACGGTAACGCCGTGACCAACCTGAGTC TGGCAACCAGCGAACAGTGGACTGACAAGCAGACCGGTCAGAAGGTCGAGAAGACCGAGTGGCACCGTGTTTCGATGTTTGGCAAGGTTGCCGAAATCGC TGGCGAATACCTGCGCAAGGGTTCGCAGGTCTACATCGAGGGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGTATCAAGCGTTACACCACCGAAATC GTCGTTGACATGCAAGGCACCATGCAATTGCTGGGCGGCCGTCCACAGGGCGACGCACAACAGGGCCAGGGTGGCGGCAACTACAACCAGTCCGCCCCTC GTCCACAGCAGTCGCGCCCGCAGCAGTCGGCTCCGCCACAGCAGAACTACAACCAGCAGCCTCCACAGCAACGCGAATCCCGCCCTGCGCCACAGCAGCA AGCGCCGCAGCCGGCTGCTGATTTCGATAGTTTTGATGACGATATTCCGTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGCAACGCCTTCAGAACCGCACCACCCAAAGCGAAGCCACTCACCGGGCTTCGCTTTTTTTATGCCTGCGTATCTCCATCCCTACATAGATGTTGCTTA ACATCAAAAGGCTTGACGGTTTAGATTTTGGTTATCATCATAATCCTGTTTTCTATCCAAAGATGTCCTCAAGCGCTTCCTCCTATACGCGCCCAAAGCT CATCCTACTGACCAAAACTCTCCAGATCACAGGCCCTGAAATGACCGAAAAAACCCTCTTCGACACGTACCGCTTAGGCAATCTCGTCCTCGCCAACCGT ATCGTCATGGCCCCTCTTACCCGCAACCGTGCGGGCGCAGGTCTGGTGCCGAGCGAGCTGGCTGCGACCTATTACGGTCAGCGTGCTTCTGCCGGTTTGC TGATTACCGAGGCCACTCAGGTTTCGCCGCAGGCGCAGGGTTATCAGGACACGCCGGGTATCTACACCCAGGCGCAGATCGATGGCTGGCGCAAGGTGAC
Amino Acid Sequence
>single-stranded DNA-binding protein
MARGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTEWHRVSMFGKVAEIAGEYLRKGSQVYIEGKLQTREWEKDGIKRYTTEI VVDMQGTMQLLGGRPQGDAQQGQGGGNYNQSAPRPQQSRPQQSAPPQQNYNQQPPQQRESRPAPQQQAPQPAADFDSFDDDIPF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site