Pseudomonas viridiflava LMCA8, RT94_RS13745

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas viridiflava strain LMCA8 contig_29, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGGCGTTGCCAGCCGTTACGTCGGCCTGTACATCGGTGCCGTGCTGTTCATGCTGGGACTGTTTCCGCACATCGGCGCCATCGTCCAGCAGATTCCCAA ACCGGTACTGGGCGGCGCAACGCTGGTGATGTTCGGCAGCGTCGCGGCGGCAGGCGTACGGATTCTGGCCCAATCGCCGCTGGATCGGCGCAGCATGCTG ATCATTGCGACCTCATTCGGAGTAGGCCTGGGCATCGCCTCACAGCCCGCGCTGCTCCACCAGATGCCCAAGCTCGTGCAGAACCTGTTCGACTCGGCCA TCACCAGCGGAGGCATCACGGCCATTCTAATGTGCCTGTTGATCCCTGAAAGCAAAGCCTGCGCCGACGTACGGACAACTGGCCAGGAAGCCGAACCCTT TGAGCCTCAACGATAATTTTCCAGTGCCTGTGCTTGCGGGATGGCCGCAGGTGCGTTATCTGTTCGTCCGTTGCGTCCCCTGACCTGCCCGGAATCGCCC
DNA Sequence for Gene
>RT94_RS13745
ATGACCCTCCAAGTCCCTGCGCACAACGCCCACGTTGCCAAGCCCGCCAGCCGCATTCGTCAGAAAAATGAAGAAGCGATCATCAAGGCCGCCGAAGACG AGTTTGCACGTCACGGTTTCAAGGGCACCAGCATGAACACCATCGCGCTGAAGGCCGGGCTGCCCAAAGCCAACCTGCACTACTACTTCACCAACAAGCT GGGGCTGTACATTGCAGTGTTGAGCAACATCATCGAACTGTGGGACAGCACCTTCAATACCCTCAGCGTTGAAGACGATCCCGCAGAAGCGCTGGCACGG TACATCCGCGCCAAGATGGAGTTTTCGCGCCGCCAGCCTCAGGCGTCGCGCATCTTTGCGATGGAAATCATCAGCGGCGGCGAATGCATGAGCGAATATT TCAGCCAGGATTACCGCTTGTGGTTCCAGGGCCGGGCAGCGGTTTTCCAGGCCTGGATCGACGCCGGCAAGATGGACCCGGTCGACCCGGTGCATCTGAT CTTCCTGCTGTGGGGCAGCACCCAGCACTACGCCGACTTCGCGTCCCAGATATGCCGCGTCACCGGGCGTACCCGCCTGACCAAACAGGACATGGACGAG GCCAGCGAAAACCTGATCAGGATCATCGTCAAAGGTTGTGGGCTAAAGCCGCCAGCCTTGTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AATTCGCACCTTGTCGCCAGCCGGATGCACGCATGCCTTTTACCCTTGCTGGCCCTTGCGAGTTTCGTGAAGAAATCCGCAAGAGCCGCTTCATCACCCT CGCCGCCCCCATCAGCAGCCCGACCGACGCGCAGGCGTTCATCGACCAGCACAGTGACCTGAACGCCACTCACAACTGCTGGGCCTGGAAACTCGGTGAT CAATACCGCAGCAATGACGATGGCGAGCCGGGCGGTACCGCAGGCCGCCCGATTCTTGCGGCAATCGAGGCGCAGGGTTTCGATCAGGTCGTGGTGCTGG TCATTCGCTGGTACGGCGGTATCCAACTGGGAACCGGTGGTCTGGCTCGTGCCTACGGTGGCGGCGCCAACAAATGCCTGCAGCAGGCAGCACGTGTGGA GCTGGTCAACCGATTGTCTTTCAACCTTGAGTGCAGCTTCAGCGAACTGGCGCTGGTCAAGGTTCGTCTGGCTGAATCGAGCGGCCTGGTTGAAGCCGAA
Amino Acid Sequence
>TetR family transcriptional regulator
MTLQVPAHNAHVAKPASRIRQKNEEAIIKAAEDEFARHGFKGTSMNTIALKAGLPKANLHYYFTNKLGLYIAVLSNIIELWDSTFNTLSVEDDPAEALAR YIRAKMEFSRRQPQASRIFAMEIISGGECMSEYFSQDYRLWFQGRAAVFQAWIDAGKMDPVDPVHLIFLLWGSTQHYADFASQICRVTGRTRLTKQDMDE ASENLIRIIVKGCGLKPPAL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site