Pseudomonas viridiflava LMCA8, RT94_RS13520

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas viridiflava strain LMCA8 contig_29, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACTTGCTGGTGAAGGGCTGAGCATGCCGATGCGGCGAATGTCGAAGTCGCTGACCAGGTATTCAAAACGCTTTTCAGCGAACGCTTTCATGTGCGGCTGC GCAGAGTGAACGTCCAGATCCTCTTTTGAGGCCCACACCTCAAAAAAGATGAACAGCGCCGGATCCTGCTGATCGCGCAACATGTGGTATTCGATGCAGC CTGGCTCGCTGCGGCTCTGCGCAACGTAGGAACTGAATAGCGCTTCGAACTCCGCTGACTTTTCAGGGCGGGTGTGGGCATGAAGGATGAAGCCGTATTG GTCGCTCATCTGGGTGGTCCTCTGCTGAAAGTGATCGCATTCTAAATCAACAATGTTGTGCTGATTCGTGACGCTAAGGCAAAAGTGATTTGTCCTCCCT CGGCTTATTCTCAAGCCACTTCGTCTTTATTCTTGCCCCCATCGATTAATGACTGGCCCAGCCGAACCATAAGGCATGGCCGAACATCCAGAGGTCTGGC
DNA Sequence for Gene
>RT94_RS13520
ATGAAGAAAGTATTGTTTCTCAACGGCGGCAAACAGTTTGCCCACTCCGACGGCCGCTACAACGCGACGCTGCATGAAGCCGGAGTGGCGTTCATGGACC GCGCCGGTTACGACGTCAAGGAAACCTTCATCGACGGTGGTTATGACGTGGCTGAAGAAGTGCACAAGTTTCTGTGGGCCGACGTCATCGTCTGGCAAAT GCCGGGTTGGTGGATGGGCGCGCCGTGGACCGTGAAGAAGTACATCGACGAAGTGTTCACCGAAGGGCACGGCAGCCTGTACGCCAACGACGGCCGCACC CGTTCCGATGCCTCGCAGAAATACGGCAGCGGCGGTTTGCTGCATGGCAAGCAGTACATGATCTCCGCGACCTGGAATGCACCGCAGCAAGCGTTCGATG ACGCATCGGATTTCTTTGAGGCCAAAGGCGTTGATGCCGTGTACTTCCCGTTTCACAAGTCCAACCAGTTCCTAGGCATGACCGGCCTGCCGACCTTTCT GGCGGTGGATGTGATGAAGATGCCGAACATCGAGGGTGATGTGAAACGGTATGAAGCGCATCTGGCCAAGGTGTTTGGCGTTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGTGATTGTCCCTGCATTCTGTGTTGGACGCAGGTCTTGCGGCACCAACGGATTGTGGGAGGCGGTTTGCCGACGATGAACGATGACGCGATGTTCCTGA CATACCGCGTCTACTGCATCGCCGGCAAGCCGCCTCCCACGGTCCAGTGTTTGCTGCAAGACAGCGCTGTGTCAGAGACACAGGGGCATCTCCCGCGGTA TCTGTATTCACTCAGTCCCTGCCGTTTAAGTCTTGATGCGCAGGCACTCCGAGCGTGGGAACGATCAGCACAACTCACGCCTTTGCTTGAAACACCGCTA ATATCCCCGGACTCTTGAGCAGGGGACAACAGTGAAAGCCAGGTCCGATGAATTGCAGGTGTTCGTTTCGGTGATCGAAAGCGGCTCCATTTCCGCCGCC GCCGAGAAGATGGGGCAGACGCCGTCCGGGATCAGCCGCACCTTGTCGCGGCTCGAGGCCAAGCTTGAGACCACGCTGATCAACCGCACTACGCGGCGCA
Amino Acid Sequence
>NAD(P)H quinone dehydrogenase MdaB
MKKVLFLNGGKQFAHSDGRYNATLHEAGVAFMDRAGYDVKETFIDGGYDVAEEVHKFLWADVIVWQMPGWWMGAPWTVKKYIDEVFTEGHGSLYANDGRT RSDASQKYGSGGLLHGKQYMISATWNAPQQAFDDASDFFEAKGVDAVYFPFHKSNQFLGMTGLPTFLAVDVMKMPNIEGDVKRYEAHLAKVFGV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site