Pseudomonas viridiflava LMCA8, RT94_RS12895 (obgE)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas viridiflava strain LMCA8 contig_25, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATTGACTCATGGCACACAAAAAAGCTGGTGGTAGTACCCGTAACGGGCGCGACTCAGAAGCCAAACGCCTTGGCGTGAAGATGTATGGCGGCCAGGCTAT CATTCCGGGCAACATCATCGTGCGTCAGCGCGGCACCCAATTCCACGCTGGCTACGGCGTTGGCATGGGTAAAGATCACACCCTGTTCGCGAAAGTGGAA GGCGTGATCAAGTTTCAAGTCAAGGGCGCCTTCGGTCGCCGCTACGTGAGCATCGTTCCGAAGACTGAAGTCTCCGCAGCGTAATCACGCAGTAGCTTAA AAGCCCTGTCTTGCGACGGGGCTTTTTCGTTTGTAGAGGTAGAGAGTCAGGTGAGTCTCTTGCAAAACTGTTTGTGCGGGCTGTTGTGATGTTGACCCCT GGGGTCGCTGGTTTCTGATCGGTATCGCAACGCTCATTTTTGCAAGAGTCTTATGTAATTTATGTGGTTCTGCTCGTCCCTGTGGCGGGAGGCGTGCGTT
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| DNA Sequence for Gene |
>RT94_RS12895
|obgE
ATGAAATTTGTAGATGAAGTATCCATTCGAGTAAAGGCCGGTGACGGCGGCAACGGTTGCATGAGCTTCCGTCGTGAAAAATTCATCGAAAACGGTGGCC CCAACGGCGGCGACGGCGGTGATGGCGGTTCGGTCTACATGATGGCCGACGTTAACCTGAACACCCTGGTCGACTACCGTTACACGCGTCACTTCGATGC CGAGCGCGGCTCCAACGGCGGCAGCACCGACTGCACCGGTCGTAAAGGTGAAGAGCTGGTGCTGCGCGTACCGGTCGGCACCACGATCATCGATGCCACC ACTCAGGAAATCATCGGCGACCTGACCAAAGACGGTCAGCGCATCATGGTTGCCCAGGGCGGCTGGCACGGTCTGGGCAACACGCGTTTCAAATCCAGTA CCAACCGTGCTCCGCGCCAGACCACGCCGGGCAAGCCTGGCGATCAGCGTGATCTCAAGCTGGAATTGAAAGTGCTGGCGGACGTCGGTCTGCTGGGATT GCCGAACGCAGGCAAAAGTACCTTTATTCGCTCGGTGTCTGCCGCCAAGCCGAAAGTGGCCGACTATCCGTTCACGACCCTGGTGCCGAACCTGGGCGTG GTCAGTGTCGATCGCTGGAAAAGCTTCGTGGTTGCCGACATTCCGGGTCTGATCGAAGGCGCATCCGATGGCGCGGGCCTGGGGATTCGCTTCCTCAAGC ATTTGGCGCGTACTCGTCTGTTGCTGCACCTCGTCGACATGGCGCCGCTGGATGAAACCAGTGCTGCGGATTCGGCTGAAATCATCGTCAACGAGCTGGT CAAGTTCAGCCCGTCCCTGGCGGATCGTGATCGCTGGCTGGTGCTGAACAAGTGCGACCAGCTGCTTGAAGAAGAGCGTGAGGCTCGCAAGCAGGAGATC GTTGATCGTCTGGAATGGACCGGTCCGGTCTACGTGATCTCTGCCATCGCCAAAGAAGGCACCGAGCAGTTGACCCGCGACATCATGCGTTATCTCGAAG AGCGCAGCCTGCGCATCGCCGAAGAGCCTGGTTACGCCGAAGAGCTGGCCGAGCTGGATCAGCGCATCGAAGATGAGGCGCGCGCTCAGTTGCAGGCGCT GGACGATCAGCGTGCGCTGCGTCGCAGTGGTGTGAAGAGCGTGCATGACATCGGCGACGATGACTGGGATGAAGAAGATGTGGACGATGAAGATGGTCCG GAAATCATTTACGTCCGTGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGCTTGAAGTAAACTTGAACGCCGCTACTTTTGTCAGCGGCGTTTTTGTATCCCGAATTTGAAAACTCTCTGGCTAAGGTTGGAAGATGATGCGCAGCA AAGTGACGGGTGCCCAGCGCTGGGTCGTGAAGATCGGCAGTGCCCTGCTGACAGCGGACGGCAAGGGTCTGGATCGCACGGCCATGAGTGTGTGGGTCGA GCAGATGGTGGCGCTGCATGAAGCAGGCGTCGAGCTGGTGCTGGTTTCCTCCGGGGCGGTGGCGGCTGGTATGAGTCGCCTGGGCTGGACGGTTCGACCC AGTGCGATGCACGAGCTGCAGGCGGCTGCCGCCATCGGTCAGATGGGCTTGGTGCAGGCGTGGGAATCCAGCTTTGCCGAGCATGATCGGCACACCGCGC AGATCCTGCTGACTCACGACGACCTGTCCGATCGCAAGCGTTACCTGAACGCTCGCAGCACGCTGCGTACTCTGGTTGAGCTGGGCGTAGTGCCGGTCAT
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| Amino Acid Sequence |
>GTPase CgtA
MKFVDEVSIRVKAGDGGNGCMSFRREKFIENGGPNGGDGGDGGSVYMMADVNLNTLVDYRYTRHFDAERGSNGGSTDCTGRKGEELVLRVPVGTTIIDAT TQEIIGDLTKDGQRIMVAQGGWHGLGNTRFKSSTNRAPRQTTPGKPGDQRDLKLELKVLADVGLLGLPNAGKSTFIRSVSAAKPKVADYPFTTLVPNLGV VSVDRWKSFVVADIPGLIEGASDGAGLGIRFLKHLARTRLLLHLVDMAPLDETSAADSAEIIVNELVKFSPSLADRDRWLVLNKCDQLLEEEREARKQEI VDRLEWTGPVYVISAIAKEGTEQLTRDIMRYLEERSLRIAEEPGYAEELAELDQRIEDEARAQLQALDDQRALRRSGVKSVHDIGDDDWDEEDVDDEDGP EIIYVRD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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