Pseudomonas viridiflava LMCA8, RT94_RS11950

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas viridiflava strain LMCA8 contig_22, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TACGCTTGAGTCCGACGTCCTGATCCTCGACCACCATGTCCAGCAGCAGATGATGCTCGGCGCAGAAATCCCCGACCGCCTGCGCCCACCACGTGGCAAG GCTGTCGGCGTTCAGGGCGATGCGCAGTCGCTCCGGCATGCCTTCCTCGTCAAGCGCGGGCACCTGGCTTTGCAGGTCACGCTCCAGCAGCCGGACCTGT TGTACATGATTGAGCAATCGCCGCCCGATGTCGGTCGGGCTCGGCGGCGTGGCCCGGATCAGCACCGGCTGACCAATGCGCGCCTCCAGCAGTTTGATGC GCTGGGACACGGCCGACTGGGACAAACCCAATACCTGGGCAGCGCGTTCAAATCCGGCCTGCTCGATGACGGCAGCGAGCGCCGATAGCAGCTTGTAGTC AAACATCAGTTTTCCTAATGAGTGATCAGGATTATTGGTTTTCCTTATACCGCTTTTGACGCCAGAATCGCCACCTGAACCGACTGCCGGAGCGCATCTG
DNA Sequence for Gene
>RT94_RS11950
ATGTGGCAAAGCTATTTAAACGGGCTGCTCGTGGCTGCGGGCCTGATCATGGCCATCGGCACGCAGAACGCGTTCGTTCTGGCGCAAGGGCTGCGTCGTG AGCACCATGTTCCGGTGGCCTTGGTGTGCATTGTCTGCGACGCGCTGCTGATTGCTGCCGGGGTGTTCGGCCTGGCGAATGTGCTGGCGCAGAACCCTAC CCTGCTGGCCATCGCGCGTTGGGGTGGCGTGGCATTCCTGAGCTGGTATGGCCTGCAGGCCCTGCGCCGTGCCTGTTCATCGCAAGGCCTGGAAAACAGC GCCGCCACCGGGATGAGGTCGCGGCGCGCCGTGTTGCTCAGTGCGCTGGCCGTGACCCTGCTCAATCCGCATGTCTATCTGGACACCGTGTTGCTGATCG GATCGCTCGGTGCACAGCAGGCCGTACCCGAAGCCTACGTGGTCGGTGCCGCCAGCGCCTCGCTGCTGTGGTTCTCGAGTCTTGCCATCGGCGCAGCCTG GCTCGCGCCCTGGCTGGCCCGTCCAGCAACCTGGCGACTGCTGGACGTGCTGGTGGCGGTGATGATGTTTACCGTTGTTGTGCAGTTGATTCGCAGCGCT TGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTGATTTTCATGGCCATTGGGTCGACAACGCTGGAACCTCTTTCCCACACAGTTGTTGCGTGGTTATGCCGCAGGGCCGGTGCTATAGTCCGGGGTCTGC GCCGCAAAAGAGTAAAACTCCCGGTGCATGCTGTATCCGGCCGCCCGTGATCGGCCGTGCGATAACCGCAAATGACCTGAAAGGAGATAAACCATGGCTT TTGAATTGCCGCCACTGCCTTATGCCCACGATGCTCTGCAGCCGCACATTTCCAGAGAAACGCTGGAATATCACCACGACAAGCACCACAACACCTACGT CGTGAACCTGAACAACCTGGTGCCAGGCACCGAGTTCGAAGGCAAGACTCTGGAAGAAATCGTCAAGACCTCCTCGGGTGGCATCTTCAACAACGCCGCT CAGGTCTGGAACCACACCTTCTACTGGGAATGCCTGTCGCCTAACGGTGGCGGTGAACCTACCGGCCCGCTGGCTGACGCAATCAACACTGCGTTCGGTT
Amino Acid Sequence
>amino acid transporter LysE
MWQSYLNGLLVAAGLIMAIGTQNAFVLAQGLRREHHVPVALVCIVCDALLIAAGVFGLANVLAQNPTLLAIARWGGVAFLSWYGLQALRRACSSQGLENS AATGMRSRRAVLLSALAVTLLNPHVYLDTVLLIGSLGAQQAVPEAYVVGAASASLLWFSSLAIGAAWLAPWLARPATWRLLDVLVAVMMFTVVVQLIRSA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site