Pseudomonas viridiflava LMCA8, RT94_RS11780

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas viridiflava strain LMCA8 contig_22, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCTGCTCCACCTTCTCTTTTGAAGGACTTGCACGCCAGCGCAATTCCTCACGAGTGGACGCCGGATATCCTCACCCGCCTGTGGCGCAAGCTGGCGCTCA ATTGCGCGATCAATCCACTGACCGTGCTGCACCATTGCCGCAACGGCGAACTGCTGGAGCATCACTGTGAAGTCGCCACGCTCTGCGCCGAGCTGACCGA TCTGTTGCATTGCTGCGGTCAGCCGGCGGCCGCTGCTGACTTGCACAGCGAAGTGTTGCGGGTCATCAAGGCCACGGCGGCGAACTACTCGTCCATGTAT CAGGACGTGGCGTACCAGAGGCGCACCGAAATCAGCTATCTGTTGGGCTACGCGTGTACTGCTGCCAAGCGCCATCATTGCCCGGTGCCGCATTTGCAGC AGTTGCAGGCGCGGCTGGTCAAACATCTGGCAAGCAAGGGTTTGCGTACTGACTAGCCCGCGCTACCCTGCTTGCTCCACCTGCCACTGCGACCTGCCCC
DNA Sequence for Gene
>RT94_RS11780
ATGCCTTTGCGCCAACGCCTGGAAAACCTGCCTGTCGGCCAGAAGTTGCTGGCTGCCCTGCTGGTTCTGATGACCACCGTCCTGCTGGTGGCCAACCTGA CCTTCATCAGCGCGGCCTATTACATTTCCCAGGAAGCCATGGCGCCGCAGGCGTTGCAGACCATCGGCCGCCTGATCAGCAGCGCCAACCTCAATGAAAA CGCGTTGAATTCGCCCGACGACGCGCGCGCATTGCTGAGGGAGCTGAAAAGCTACGGTCCGTTACGGGCGGCAGCCATTTACGACAACGATGGCGAACGC CTGGGGCAAGTGCAGCAAGGCGAAGGGCTTGAGTTGCCCCATCACTTCAAAGACCTTGAAAGCTGGCGTCTGACCGAGTTTCGCAGCACGCAGGTCATCA CCGTACCCAAAGGCGAGCAACCACCGGGCCATCTATTGCTGGTCGCCAGCAGCGAACTGCCGCCTGCGTTTTATACCGGCACCCTGACTGCCAGCCTGGG CATTCTGGTGTTCAGCGTATTGCTGTGGCTGGTCGTGGCCCGGCAGATCCGACGCCTGATCACCGAGCCTATCTATCAATTGGAAGAGCTCTCCCGTCAG GTCACCCGCGAAGAGAACTACGCGTTGCGCGCCGAGCCTGGTAACGAAGATGAAATCGGCAGCCTGGCTGAAGCGTTCAACACCATGCTGTCGCGTATCG AAGCGCGCGAACAGCAACTCAAGCGCGCCCGCGACGACTCTCAGGAAGCCTACGATCAGGCACAGGGTCTTGCCGAAGAAACCCGGCACACCAATCGCAA GCTCGAGCTGGAAGTCCAGGTGCGCAGCAAGATCGAAAAGAAGCTCACAGGCTTTCAGAACTACCTCAACAGCATCATCGACTCGATGCCCTCGGCCATG ATCGCCCTCGACGAGCAACTGTATGTGACCCAGTGGAACCAGGAGGCCAGCGCGCTTTCCGGCACAACCCTGGACGAGGCGATGAACCAGCCGATTTTCA TCGCTTTCGAGCCAATGCGCTCGTTTCTGCCACAGATCAAACACACGGTTGAACGACACAGCGTCACCAAGATCGAGCGCGTCACCTGGATCAAGAACGA CGAGTCTCGCCATTACGCGCTGACGTTTTACCCGCTGACCGGCGACGCAGGTCGCGGCGTGGTAATCCGGATCGACGACATTACTCAGCGCATCTCGCTG GAAGAAATGATGGTGCAGTCGGAAAAAATGCTTTCGGTTGGCGGCCTCGCAGCAGGCATGGCCCACGAGATCAACAACCCATTGGGCGCGATCCTTCATA ACGTGCAGAACATCCGCCGACGTCTGTCGCCAGACCTGCCGAAGAACATCGAGCAGGCCGAAACCGACGGGATCGACCTGGCCGTGGTGAACAACTACCT GACCAGCCGCGAAGTGCCGCAATTGCTGGATGGCATCCAACAGGCAGGCGCGCGAGCCGCGAAGATCGTCAGCCACATGCTCAATTTCAGCCGGCTGAGC AACCGTCAGCTCTCGCCCTGCGACTTGCCTGCACTGATCGATCAGGCGGTGGAAATCGCCAGCAACGACTTCGACCTGACCATCGGTTTCGACTTCAAGG GCCAGCACATCATCCGCCAGTTCGATCCGGAGCTGGGGCCAGTGCCGTGCATTGCCAACGAGCTGGAACAAGTGCTGCTGAACCTGCTGAAAAACGCCGC CCAGGCGATTCATCAACGGCCCGATGGCGAGGACGAGGGACGCATCATTCTGCGCACCCGACTCAATCCACCATGGGCAGAGATTCAGGTGGAAGACAAC GGCATCGGCATGTCCGAAAGCGTGCGCAAACGCACCTTCGAGCCGTTTTTCACCACCAAGGAGATCGGTCAGGGCACTGGACTGGGCCTGTCGGTGTCGT ACTTCATCATCACCAACAACCACAAGGGCCAGATGGAAGTGCAATCTTCCGTCGGCAATGGAACCTGCTTCACGCTGCGCCTGCCGCTGATCGCCAATCA GGTGAATGTCCAGCAACAGGTTATTTCCAAGCTATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCAGGAGCCACTGAATGGGCTTTCGTTTGTCGAAAATCTACACACGTACCGGCGATGCCGGGGAAACGGGGCTGGGCGACGGTCGCCGGGTGTCCAAGGA TCACCCGCGCGTCGAAGCCATCGGCGAAGTCGATACACTCAACAGCCAGCTTGGTCTGCTGTTGGCCGGATTGATCGAACTGGCGCCGAGCGTGTCCGGG CTCAACGAAGTGATCGATGTTCTGGCGCCTTGTCAGCACCGTCTGTTCGATCTGGGCGGCGAACTGGCGATGCCGAGTTACAAGGCATTGAACAGCGCTG AGGTCGAGCGTCTCGAGGCGGCGATCGATGTCTGGAACGAGGAACTGGGGCCACTGGAAAACTTTATCCTGCCCGGCGGTTCAGCGCTGATTGCACACGC TCATGTGTGCCGCAGCCTGGCCCGCAGTGCCGAGCGTCGCTGCCAGCATCTGAATGCGGTCGAACCGCTGGAAGGCTCTGGTCTGGCGTATATCAACAGA
Amino Acid Sequence
>histidine kinase
MPLRQRLENLPVGQKLLAALLVLMTTVLLVANLTFISAAYYISQEAMAPQALQTIGRLISSANLNENALNSPDDARALLRELKSYGPLRAAAIYDNDGER LGQVQQGEGLELPHHFKDLESWRLTEFRSTQVITVPKGEQPPGHLLLVASSELPPAFYTGTLTASLGILVFSVLLWLVVARQIRRLITEPIYQLEELSRQ VTREENYALRAEPGNEDEIGSLAEAFNTMLSRIEAREQQLKRARDDSQEAYDQAQGLAEETRHTNRKLELEVQVRSKIEKKLTGFQNYLNSIIDSMPSAM IALDEQLYVTQWNQEASALSGTTLDEAMNQPIFIAFEPMRSFLPQIKHTVERHSVTKIERVTWIKNDESRHYALTFYPLTGDAGRGVVIRIDDITQRISL EEMMVQSEKMLSVGGLAAGMAHEINNPLGAILHNVQNIRRRLSPDLPKNIEQAETDGIDLAVVNNYLTSREVPQLLDGIQQAGARAAKIVSHMLNFSRLS NRQLSPCDLPALIDQAVEIASNDFDLTIGFDFKGQHIIRQFDPELGPVPCIANELEQVLLNLLKNAAQAIHQRPDGEDEGRIILRTRLNPPWAEIQVEDN GIGMSESVRKRTFEPFFTTKEIGQGTGLGLSVSYFIITNNHKGQMEVQSSVGNGTCFTLRLPLIANQVNVQQQVISKL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site