Pseudomonas viridiflava LMCA8, RT94_RS09995

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas viridiflava strain LMCA8 contig_16, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATGACCTTCGCCGCTGCCCTTCAGGCTGGCTTCGAAGACGGTCACTTCCAGTGCCTTCAGCGTGCCGTCAGCCTGAGGAATGGCTGCCGAGCCGACAAAG CTGTCAGCCTTGATGCTTTCCAGATCAGCCTTGGACACTAGGCGGATGCCGGTCTTGTCGGTCAACTGGATGCTCTGATGCTGACCGGCGCGGGTGGTGA AATTCAGCGTATCGGCCTGGAGGCTGTCGACGGTGCCGCGCATCGGCTTGACCACCGGCATGTCGGCGGCCTGAGTCATGACAGCGGCGCTGAGCAGCAA CAGGCCGAACGTAGTGGACAGTGCAGTCTTCATCGGTAATTCCTTGGCAGAGAGGTCTGGACGCATCTTTACACCGCTACCGGCACCGCAGAATGACCGG GCAATGACATTTTTGTCATTCGCCGGACACCTTCCCGGCAACTGGTTAGACTTCGGCATCGGCGCGCTGAGGGCGCCTGCAGAGCGTAGCGGACATTGAG
DNA Sequence for Gene
>RT94_RS09995
ATGCATATCCTTCTGATCGAAGACGACACCAAGACCGGGGAGTACCTGAAGAAGGGCCTGGGCGAATCCGGCTATAAGGTCGACTGGACCCAGCACGGTG CCGACGGCCTGCACCTTGCGCTGGAAAACCGCTACGATTTGATCGTGCTCGACGTGATGCTGCCCGGTATCGACGGCTGGCAGATCATCGAAGTGCTGCG CGCCCGGCAGGACGTGCCGGTGCTGTTTCTGACCGCCCGCGATCAGTTGCAGGACCGCATTCGCGGACTGGAACTGGGTGCCGACGACTATCTGGTCAAG CCGTTCTCGTTCACCGAACTGCTGCTGCGCATTCGCACCATCCTGCGCCGTGGCGTGGTGCGTGAGGCCGATCATTTCCACCTGGCCGACCTCGAACTGG ACCTGCTGCGTCGTCGGGTCACCCGTCAGCAACAGGTGATCGTGCTGACCAACAAGGAGTTCGCCCTGCTGCACCTGTTCCTGCGCCGCGAAGGCGATGT GCTGTCGCGCACCCAGATCGCCTCCGAAGTCTGGGACATGAATTTCGACAGCGACACCAACGTGGTGGATGTCGCCATCAAACGCCTGCGCAGCAAGATT GACCTTCCCCACCCGGTCAAGCTCATCCACACCGTGCGCGGCATCGGTTATGTGTGCGAGGTGCGGCCATGCAGCGCAGACGCCAACCTTCCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCTGCGCTCGACCCTGGCGTTCGCGCTGGTGGCAATGCTCACGGTCGGCGGCGCAGGCCTGTACCTTTACCAGTCCATCGAACAGACCGTAATGCAGCG CTCCGACCATGCGGTGCTGGCGCGTCTGGATCACTTTCGCAAGCTGCTGCGCTACGACCTGACCATGGACAACCTCAAGGGCAGCCCGCAACTGTTCGAG AACATGCTCGACAGCGAGGAAGACATTTTCATTATTGGCGAACCCGGCAAGGCGCCGGTGATCTCGGTCAACCCGCAACGCGCTCCTTTGCCGGAGCTGC CAACCGTTGCCCAGGATCAAGCCCTGCGCGTCGAAGACCTGCGCAGCGGCCTGAGCCTGCAGGGTGTGCCTCTGCGTGCGGCGGCCGTGCAAGTGATGTC CAACGGAGTCGAAGTACGTTTGCAGGCCGCGCACCTGATGGTCAAGGAAATGGCCATGCTTGCGACCTTCCGCGAGCGTATCTACGCGGCAATGGCGCTG
Amino Acid Sequence
>transcriptional regulator
MHILLIEDDTKTGEYLKKGLGESGYKVDWTQHGADGLHLALENRYDLIVLDVMLPGIDGWQIIEVLRARQDVPVLFLTARDQLQDRIRGLELGADDYLVK PFSFTELLLRIRTILRRGVVREADHFHLADLELDLLRRRVTRQQQVIVLTNKEFALLHLFLRREGDVLSRTQIASEVWDMNFDSDTNVVDVAIKRLRSKI DLPHPVKLIHTVRGIGYVCEVRPCSADANLP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site