Pseudomonas viridiflava LMCA8, RT94_RS09435

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas viridiflava strain LMCA8 contig_15, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGGTGGCGGTGTAGAACGCCGGAATGCCTGCGCCGCCCGCGCGGAGTTTTTCGGCAAGGGTGCCTTGCGGGGTCAGTTCGACTTCCAGTTCGCCGCTGA GCAACTGGCGTTCGAACAGGGCATTCTCACCCACGTAGGAGGAAATCATCTTTCTGATCTGGCGGTCTTCGAGCAGGATGCCCAGACCGAAACCATCGAC GCCGCAGTTATTGGAAACGACCGTGAGGCCCTTGATGCCCATGCGCTTGATCTGCGCGATCAGGTTCTCGGGGATGCCGCACAGGCCAAAGCCGCCACAG AGCACGGTCATGTTGTCGGTCAGCCCGGCGAGGGCCTCTTCGTAAGTTGCCACTCGCTTGTCGAGTCCAGCCATGATGATCCGCCTTTTATAGTTGTGAC CGGCACGTGCTGCCGGAGGATCGGGTTGATTGCATCTTCTCTCGGCTGCAATGATTTGTTAATTTTGTTTTTCTGATCGATTGATAAGAAAGATAAATAT
DNA Sequence for Gene
>RT94_RS09435
ATGAACGTTAAGCAGCTTCGCGCTTTCCTGGCCGTGGCGCAGTACCTGAGTTTTGCGCAGGCGGGCGAGCGGCTGAACCTGTCCCAACCGGCCCTGAGCC TGACGATCAAAAGTCTGGAGGAAGACCTTGGCGGTCAGTTGCTCACGCGCACCACGCGCAATGTCAGCCTGACGCCCGAGGGCGAGACGCTGTTGCCGCT GGCACGCCAACTGATGGCTGACTGGGACAATACCGAAGAGTTGCTGCGCCAGCGTTTCACCTTGCAGATGGGACGCGTGTCCATCGCGGCCATGCCGTCG TTCGCAGGCAACCTCCTGCCCGGTGCCTTGAAGACCTTCAGAGGCCGCTATCCACGGGTCAACGTGGCGGTGCATGACGTGGTCAACGAACAGGTTCTGG AAATGGTGCGTCATCGCCGAGTCGAATTGGGCATCGGTTTCGAGCCGGAATCGAGTAATTCGCTGTCGTTTACCCCGTTCTACATGGATCGATTCGTGGC CGTGGTCTCCACGGAATCGTCGCTGGCCGGACGCGCTGAAGTGTCCTGGGCCGACCTGTTGAACGAAGATTTTATTGCACTGCAGCGCCCGTCAGCCGTG CGCCTGCTGCTGGAGCACGCCATCGAGTCACGACATGGCAGGTTGTCAGTGGCATTCGAGAGTCATCAACTGTCTACCATCGGGCGCATGGTCGCCAACG GTCTGGGTGTCAGCGCGGTGCCTTCGCTGTGCATTGAACAGATGCAGGAGCTTGGCGCGTGTTGCGTGCCGCTGGTGGAACCGCGTATCGAGCGGCGTAT CGGGTTGATGATGCTGGCTGATCACAAGCTGTCGGCAGCGGCTCAGGCCTTGCGCGAGGTGTTGATCGAGCATGCCCGTGAACAGGGGGCGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AAGTCGATAGCCACTATCACGGCAGTTGATTTTTGCCGTGAAGGGCCGGGGCGTAACCTTGCTTCATTCCCGAAATGAAGCCAGCCTGGAGGCCCGCCAT GAACCGTTTACTTGCCCTTGCTCTTGTTCTGTCATTCACCGTCGCACTGGTCTCCGGTTGCTCGACTCATCATGCGGTCGAACTGCGCCCCTACTCGGTC GAAGAGAGCCATCAACTGGCGATGGAAGACCTGAATCGTCGTGGTCTGTCCTTCGAAGAGTATGAGGCCCGTAAGGCCCAGCTCCTTGCAGACCCGCAGA TCCAGCAGGTTCGTCAGTTCGACAACCAGGGTGAAATCAGCGTTGATCGCGGCACACTGAGCCAGAATCCTCAGGGATAACAGTCAGGCCCGAACGAGAA TTCTGTTCAAACTGTATGGTAAGAAACTTCGTTTAACTGTCCATGTGTTTGCTGTCGATCTTTCGATAGGGTGAGTACCCGACTCACAGTTTCACAGACA
Amino Acid Sequence
>LysR family transcriptional regulator
MNVKQLRAFLAVAQYLSFAQAGERLNLSQPALSLTIKSLEEDLGGQLLTRTTRNVSLTPEGETLLPLARQLMADWDNTEELLRQRFTLQMGRVSIAAMPS FAGNLLPGALKTFRGRYPRVNVAVHDVVNEQVLEMVRHRRVELGIGFEPESSNSLSFTPFYMDRFVAVVSTESSLAGRAEVSWADLLNEDFIALQRPSAV RLLLEHAIESRHGRLSVAFESHQLSTIGRMVANGLGVSAVPSLCIEQMQELGACCVPLVEPRIERRIGLMMLADHKLSAAAQALREVLIEHAREQGA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site