Pseudomonas viridiflava LMCA8, RT94_RS09430

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas viridiflava strain LMCA8 contig_15, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGCACCGCCACGTTGACCCGTGGATAGCGGCCTCTGAAGGTCTTCAAGGCACCGGGCAGGAGGTTGCCTGCGAACGACGGCATGGCCGCGATGGACACGC GTCCCATCTGCAAGGTGAAACGCTGGCGCAGCAACTCTTCGGTATTGTCCCAGTCAGCCATCAGTTGGCGTGCCAGCGGCAACAGCGTCTCGCCCTCGGG CGTCAGGCTGACATTGCGCGTGGTGCGCGTGAGCAACTGACCGCCAAGGTCTTCCTCCAGACTTTTGATCGTCAGGCTCAGGGCCGGTTGGGACAGGTTC AGCCGCTCGCCCGCCTGCGCAAAACTCAGGTACTGCGCCACGGCCAGGAAAGCGCGAAGCTGCTTAACGTTCATATATTTATCTTTCTTATCAATCGATC AGAAAAACAAAATTAACAAATCATTGCAGCCGAGAGAAGATGCAATCAACCCGATCCTCCGGCAGCACGTGCCGGTCACAACTATAAAAGGCGGATCATC
DNA Sequence for Gene
>RT94_RS09430
ATGGCTGGACTCGACAAGCGAGTGGCAACTTACGAAGAGGCCCTCGCCGGGCTGACCGACAACATGACCGTGCTCTGTGGCGGCTTTGGCCTGTGCGGCA TCCCCGAGAACCTGATCGCGCAGATCAAGCGCATGGGCATCAAGGGCCTCACGGTCGTTTCCAATAACTGCGGCGTCGATGGTTTCGGTCTGGGCATCCT GCTCGAAGACCGCCAGATCAGAAAGATGATTTCCTCCTACGTGGGTGAGAATGCCCTGTTCGAACGCCAGTTGCTCAGCGGCGAACTGGAAGTCGAACTG ACCCCGCAAGGCACCCTTGCCGAAAAACTCCGCGCGGGCGGCGCAGGCATTCCGGCGTTCTACACCGCCACCGGTTACGGCACCCCCGTTGCCGAAGGCA AGGAAACCCGCCAGTTCAATGGCCGCAACGTGATCCTCGAAGAAGCCATCACCGGCGATTTCGCGTTGATCAAGGGCTGGAAGGCTGACCATTTCGGCAA CGTGATCTATCGTCATACCGCGCAGAACTTCAACCCCGTGGTCGCCACCGCCGGCAGGATCACCGTGGTCGAAGTCGAGGAAATCGTCGAACCCGGCGTG CTGTTGCCGACCCAGATCCACACCCCCGGCATTTATGTCGACCGTGTGATCCAGGGCACTTTCGAAAAACGCATCGAGCAGCGCACCCTCAGAAAATCCT GA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGGCGACAGGCGCTTCACGAAGCAGGAATCGGCACACAACAACAAAGAGATTTCAGACCATGGCACTTTCCCGCGAACAAATGGCTCAGCGCGTCGCCCG CGAACTCAAGGACGGCTATTACGTGAATCTGGGGATCGGCATTCCGACGCTGGTCGCCAACTATGTCCCGACGGACATCGACGTCATGCTGCAATCGGAA AACGGCCTGCTGGGCATGGGCGAATTCCCCACCGAAGACACCATCGACGCCGACATGATCAACGCTGGCAAGCAGACCGTCACGGCGCGCATCGGCGCAT CGATTTTTTCGTCCGCCGAGTCCTTCGCCATGATCCGTGGCGGCCATGTGGACCTGACGGTGCTGGGTGCTTTCGAGGTGGATGTCGAAGGCAACATCGC CTCCTGGATGATCCCCGGCAAGCTGGTCAAGGGCATGGGCGGCGCGATGGATCTGGTGGCCGGTGCCGACAACATCATCGTGACCATGACCCATGCATCC
Amino Acid Sequence
>3-oxoacid CoA-transferase subunit A
MAGLDKRVATYEEALAGLTDNMTVLCGGFGLCGIPENLIAQIKRMGIKGLTVVSNNCGVDGFGLGILLEDRQIRKMISSYVGENALFERQLLSGELEVEL TPQGTLAEKLRAGGAGIPAFYTATGYGTPVAEGKETRQFNGRNVILEEAITGDFALIKGWKADHFGNVIYRHTAQNFNPVVATAGRITVVEVEEIVEPGV LLPTQIHTPGIYVDRVIQGTFEKRIEQRTLRKS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site