Pseudomonas viridiflava LMCA8, RT94_RS06785

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas viridiflava strain LMCA8 contig_12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGACGGGCGAGGCGCTGTTCAGTGGCATGTACCTCAATGAATTGCTGATTCGTCTGCTGCCTGCCGAAGATCCGCATCCTGCCGTGTTCGAACACTATGC CGCCACGCTGATCGCCCTTGCCGAAGGACGGGCGCTCGAGCCCTTGCTTCGCTCATTCGAATGGCGTCTGCTGGACGATCTCGGCTACGGTTTTGCGCTG GATACCGATATCAACGGTGAGCCTCTGGCCGCAGACGGCATGTACCGCCTGCAGGTCGACGCCGGGCTGGAACGGGTCTGGCTGTTGCAGCCCGGTCTGT TTCAGGGCGTTGAGCTGCTGGCCATGGCCGAAGCCGACTGGAGCGCGCCGGGTGCGCTGTCTGCCGCCAAGCGTCTGATGCGTCAGGCACTGGCCGTGCA CCTGGGCGGTCGTCCATTAGTCAGCCGTGAACTGTTTCGCAAGCCGTAATCAGGCTTTATGCTCTGCGGCCTGCTTCGATCAACTTTCAGGAGACCTCCC
DNA Sequence for Gene
>RT94_RS06785
GTGACTCAAAGCACCCGCATCCTTCTCGGCGTGAACATCGATCACGTGGCTACTTTGCGCCAGGCGCGCGGCACGCGTTACCCGGATCCGGTCAAGGCCG CGCTGGACGCGGAAGAGGCGGGTGCCGATGGCATCACGGTTCACTTGCGCGAAGACCGTCGCCACATCCAGGAGCGCGACGTGCTGCTGCTCAAGGACGT GTTGCAGACTCGCATGAACTTTGAAATGGGCGTGACCGAAGAGATGCTCGCGTTTGCCGAGCGCATTCGTCCGGCGCATGTGTGTCTGGTGCCGGAAACG CGTCAGGAATTGACCACCGAGGGTGGTCTGGACGTGGCGGGTCAGGAAGCGCGCATCAAGGCAGCGGTCGAGCGGCTGTCGAAGATCGGCTGTGAAGTAT CGTTGTTCATTGATGCTGACGAGCGCCAGATTGCGGCTTCAGCGCGTGTCGGTGCGCCCGCCATCGAACTGCACACCGGTCGCTACGCCGACGCGCAAAC TCCTGTCGAAGTGGCTGAAGAGCTGCAACGGGTCGCCGATGGCGTGACCTTTGGTCTGGCTCAGGGTTTGATCGTCAACGCCGGTCACGGCCTGCACTAT CACAACGTCGAACCGATTGCCGCGATCAAGGGTATCAACGAACTGAACATCGGCCATGCACTGGTGGCGCATGCACTGTTCGTGGGCTTCAAGGCGGCGG TGGCAGAGATGAAAGCGCTGATCGTCGCGGCTGCGCGATAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAGCGCCAATCTCCATACGGGCTGTGGGAGGCCCCACCAGATCTTCGATGTAGCGCTGTCGCGCAACAAGCCGCCTCTTATCAAACAACCTGTAAGCCA CTGAAGAAACTGGATTTTGTGGGAGCGGACCGGGCGGCGTTCCGTTTGTCCGCGAATGCTGTAGTTCAGCCGATGAATATTCGTCGGATGTACAGACCAT TTCGCGGACAAGTCCGCTCCCACCTAGTTTGCTGCGCGACAGCGCTACGTCGAAGACATAGTGGCGCCTCCCACAGAGTTTGCAGTTATCCAGCTATACG TGTGCAGAGCGTGCGACACGATCATTCGCCAATCTTCATTTGCGCCGGAACCATTCCCTTTCGCCGTTCTCAGATAGCAGTAAGCCAAGGCTGCATTGGG TCGTGGCACGTTCAATTCATACAGAGGGAAATGGCATGGGTATCATCGGAACCATCTTCATTGGCTTGATCGTCGGCCTGCTGGCTCGTTTTCTGAAGCC
Amino Acid Sequence
>pyridoxine 5'-phosphate synthase
MTQSTRILLGVNIDHVATLRQARGTRYPDPVKAALDAEEAGADGITVHLREDRRHIQERDVLLLKDVLQTRMNFEMGVTEEMLAFAERIRPAHVCLVPET RQELTTEGGLDVAGQEARIKAAVERLSKIGCEVSLFIDADERQIAASARVGAPAIELHTGRYADAQTPVEVAEELQRVADGVTFGLAQGLIVNAGHGLHY HNVEPIAAIKGINELNIGHALVAHALFVGFKAAVAEMKALIVAAAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site