Pseudomonas viridiflava LMCA8, RT94_RS06075

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas viridiflava strain LMCA8 contig_11, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACCTATCAGACGCCGGCCTTGCAGCGACTGTGTCCGGTTCAGGCTTATATAGACTGGATCAACTGTTCGGCACTGGTGCGCGGCCCGGTATTCCGGGCCG TGGATCGCTGGGGCAATCTGGGCGAGGAGGGGCTGCACGCCAACAGCATCATTCCTGTGTTGCGTCAGGCGCTGAGCCGCGCCGGGATTGCCGCGCAACC GTACACCAGCCATTCGCTGCGTCGTGGTTTCGCGAGCTGGGCGCACCGTAGCGGCTGGGACCTCAAGTCACTGATGGCCTATGTGGGCTGGAGGGACATG AAGTCCGCGATGCGTTACATTGAGGCCGCACCATTTTTGAGCTCTCCCGAGAGCGAGAGCGGCCTGAAGGTTTCTTCTATTGATAAGCCGCTTCCATAGC GAAAAGCAATCAGTGACATCAGGTTTGCCAATGAGCCTTTGTCATCGATCATGCGTAAGCTTCACTTCATCGAAATCACAACCCATCAGGAGATATACCG
DNA Sequence for Gene
>RT94_RS06075
ATGCCTATCATCAACAGCCAGGTAAAACCGTTCAAGGCAACTGCTTACAAGAACGGCTCTTTCGTTGACGTTTCGGATGCCGACTTCAAAGGCAAGTGGT CTGTCGTATTCTTCTACCCGGCCGACTTCACCTTCGTTTGCCCGACCGAACTGGAAGACCTCGCTGACAACTACGCTGAGTTCCAGAAGCTGAACGTTGA AATCTACAGTGTTTCGACTGACACCCACTTCGCCCACGCTGCATGGCACAACACATCGCCTGCAATCGGCAAGATCCAGTACACCATGATCGGCGACCCG ACCCTGACCATTTCGCGCAACTTCGACGTGCTGATCGAAGAAGCCGGTCTGGCTGACCGCGGTACCTTCGTGATCAACCCTGAAGGTCAGATCAAGATCG TCGAGCTGAACGATGGCGGCGTAGGCCGTGACGCTTCCGAGCTGCTGCGCAAGATCAAGGCTGCTCAGTACGTTGCTGCTCACCCGGGTGAAGTCTGCCC AGCCAAGTGGAAAGAAGGCGAGGCCACTCTGGCTCCGTCTCTGGACCTGGTCGGCAAGATCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCGTATGAATCGGCTAGGGGCGTTGAGCTCTTGAGCAAGTAAACCGCATCGCCCCAAAAAACGCCCGGGCGGTCATCGCCTGGGCGTTGTTATTTCTAC TCTCTGAAAATTTTGTCAAAGGAAGCCGCAACATGTTGGACGCCAATCTTAAAGCCCAGTTGAAATCTTACCTGGAGCGGGTCACTCGCCCCATCGAGAT CGTCGCGTCCCTTGATGACGGCGCGAAGTCTCAGGAAATGCTTGCACTGCTCAACGATGTGATCAGTGTTTCCAAAGACGTCACCTTGAATGACAGCGGT ACCGATGCGCGCACGCCATCGTTCTCGCTGAACAGCCCTGGCCACACTATCAGCCTGCGTTTCGCTGGTATTCCAATGGGCCACGAATTCACCTCGCTGG TCCTGGCGCTGCTGCAAGTCGGCGGCTACCCACCCAAGGTCAGTGCGGAAACCATCGAGCAGGTTCGCAATCTTCAAGGCGAATTCAAGTTCGAAACCTA
Amino Acid Sequence
>alkyl hydroperoxide reductase
MPIINSQVKPFKATAYKNGSFVDVSDADFKGKWSVVFFYPADFTFVCPTELEDLADNYAEFQKLNVEIYSVSTDTHFAHAAWHNTSPAIGKIQYTMIGDP TLTISRNFDVLIEEAGLADRGTFVINPEGQIKIVELNDGGVGRDASELLRKIKAAQYVAAHPGEVCPAKWKEGEATLAPSLDLVGKI
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site