Pseudomonas veronii R4, SU91_RS29580

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas veronii strain R4 scaffold00001, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCCGCGACGTGGAACGCCCGCCGCTGACCCTGGTGCCCGGCCAGGAAAAAGGCAAGGACATCGGCTGAAGGCCAAACCACGCCGCTCTTTGTGGTCGCTG TGGAGCCCCGGCGAGGCTCTACAGCGCCTCCAACGGTTCTGCAGCATCAGGTTTGCCGCTCGTCGCCAATCGGTTTGCCCTGCAATCTCGATAAATGAGC CCTGGTTCACAAAACTCCTGCGAACTTTTCCGTCTTTCCCGGTACTAACCTAACTCGGCAATAACTTGATGGCCAAGTAGTGGCAATTAATAAATTATTC GCTGAATCAACATCAAAATAGTTGCCGTTTGTCGGAATAATACTTCCGGTGAGCGTTTGCTTATCTGTTTTGATTATTTTTATGGTTATAAATCAGTGTG TTGCAGAACTATCTAGAACTTTCGTGCAACTAATCCAGTCCCTTGGGTCAGCCGAAGTTCGATGTTAGTTTGCCGCGCCTTGATTTTCGACGGATCGAAC
DNA Sequence for Gene
>SU91_RS29580
ATGTCTTTGTTATTGCCACGGACTCGGTATCTTCTGTGTACTTTGCTGCTCGCCTGGTTAAGCCTGAACAGCGCCACGGCCGCCCCCACGCCGGGCGATC AGGACCTGATCCGCGACCGCCAGAACCGCCTGCTCGACGAGCAGCGCCGGCGCCTCGACGAGCTCAAGGACCTGCCCGGCAAAGAAGCCAAGCCCCAGGC CCCGGCCACGCCCGCCGACAGCCGTTGCTTCCCGATCCGGGACATCACGCTCAAAGGCGCCGACAGCCTGCCCGCCACCGACCGCGAGCGCCTGCTCAAA CCCTATGTCGGCCAGTGCCTGGGCGTGTCGCAGCTCAATGAACTGCTCAAGGTCATCACCGATTACTACATCGACAAAGGCCGGGTCACCAGCCGCGCCT ACTTGCCGCAACAAGACCTTTCCAGCGGCCACCTCCAGGTGCTGGTGGTTGAAGGCAAACTCGAAGGACTCAAAGGCGCCCAAGGCAGCAGCGTGACTGA TCGCGAGCTGGCCATGGCCTTTCCCGGCAAGGTCGGCGAGGCGCTCAACCTGCGCGAAGTCGAGCAACTGGTGGACCAGCTCAACCGCCTGCCCTCCAAG CAGGCGCAAATGGAACTGACCCCCGGCACCCAGGTAGGCGGCAGTGACGTCGTGGTCAAGAACACCCCGCAAAAGCCCTGGCGCGCCAGCCTGTCGCGCA ACAACGATGGGCAGAAAAGCACCGGCGAACAGCAATGGGGCGCCGGCCTGGAGTGGGACAGCCCGCTCGGCCTGGCCGACCAACTGGTGCTGCGCGGCGG CCACGATGCTGTCAGCGACCACCAGAAAACCTCGAAAAACAGCATGCTCTACTACAACGTGCCGTGGGGCTGGTGGAACTTCAGTTACACCTACAACGAG AGCGACTACCGCACCTTTGGCGTGACCAACGACTACAAATTCAAGCAGAACGGCGACAACCAGAATCACCAGTTGCGCGCCGAGCGGGTGGTCCATCGTG ACGATGTGAGCAAGACATCGCTGAACGTCGGCGTGGCGCACCTGCGCACCAACAACTACATCCTCGATACCCGTACCGCCTCGAGCAGCAACCGCCTCAG CGAATTGCAACTGGGCTTCAACCACGGGCGCCGCATCGGCAGCGGGTTCGTCAACGTTGACCTGGGCATGCAGAACGGCATCGGCTTGCTCGATGCCCAG GCCCAGGACGAGCGCGATGACGCAGGCAATCGGCAGCCCAACGCGCGCTATCGCAAATACACCGCCACCGCCAGCTTCCTGCAGCCGTTCACGCTGTGGG GCGAGTCGTTCAGTTTTTCCAGCCTGGCCACCGGCCAACGCAGTGAAGACATCCTGTTCAGTCCACAGCGCATCAGCCTCGGCGGCTCAGCCTCGGTGCG CGGCTTCAAGGACCAGCAACTGAGCGGCGACAGCGGCGGCTACTGGCGCAACGACGTGCGCTGGGCGCGCCCGGTGACGCTCGATTGGCTGCGCCCGGCC TTTGCCGAATACGGCGCCAGCGTCGGCTACGACCAAGGTGTGATCAGCCACGGTCGCTACAACGACGACGTACACGGTCGGGTCTCGAGCAACTCCCTGG AGCTGTTCGCCCGGGGCAAACACGTCAGCACCAGCGTGACGTTTGCCCATTCTTTGGAACGCCCGGCAGTGATGAGCGAGCGCGAAGCGCCGATCTACTT CCGCATGGATTTCTTCCTGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTCAACGCCCCGTTACATCGAGAATTTGAAAATGGATGTTCGCCAATTTGCCTTCCTGGCCCGCCAACCTTCTGCCGCCCTGAAGCCGCGCGACGCGTTC TTCGGCCTGCCCAAGCGCGGGCTGGCCTTGATCCTCGCCAACGCGCTGTTCTGGCAGCCGCTGCTGGCCCAGGCCGAGGGCATCGTGGTCAGCGCGCCCG GCACCACCGTCGGCGCCGCGGGCAATGGCGTGCCGGTGGTGAACATCGCCACACCGAACGGCAGTGGCCTGTCGCACAACCAGTTCAAGGACTACAACGT CGGCCCCAACGGCGTGATCCTCAACAACGCCAGCGGCGCGGTGACCAACACCCAGCTGGGCGGCTACATCGTCGGCAACCCCAACCTCAAGGGCGGCGCG GCCAGCGTCATCCTCAACGAAGTCAACGGCGGCAACCCCAGCCAGTTGCGCGGCTACACCGAAGTAGCGGGGCAGTCGGCCAAGGTCATCGTCGCCAACC
Amino Acid Sequence
>ShlB family hemolysin secretion/activation protein
MSLLLPRTRYLLCTLLLAWLSLNSATAAPTPGDQDLIRDRQNRLLDEQRRRLDELKDLPGKEAKPQAPATPADSRCFPIRDITLKGADSLPATDRERLLK PYVGQCLGVSQLNELLKVITDYYIDKGRVTSRAYLPQQDLSSGHLQVLVVEGKLEGLKGAQGSSVTDRELAMAFPGKVGEALNLREVEQLVDQLNRLPSK QAQMELTPGTQVGGSDVVVKNTPQKPWRASLSRNNDGQKSTGEQQWGAGLEWDSPLGLADQLVLRGGHDAVSDHQKTSKNSMLYYNVPWGWWNFSYTYNE SDYRTFGVTNDYKFKQNGDNQNHQLRAERVVHRDDVSKTSLNVGVAHLRTNNYILDTRTASSSNRLSELQLGFNHGRRIGSGFVNVDLGMQNGIGLLDAQ AQDERDDAGNRQPNARYRKYTATASFLQPFTLWGESFSFSSLATGQRSEDILFSPQRISLGGSASVRGFKDQQLSGDSGGYWRNDVRWARPVTLDWLRPA FAEYGASVGYDQGVISHGRYNDDVHGRVSSNSLELFARGKHVSTSVTFAHSLERPAVMSEREAPIYFRMDFFL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site