Pseudomonas veronii R4, SU91_RS26640

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas veronii strain R4 scaffold00001, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGCGATCCCGGTCAAGCTGGCGATGGAAGTGATGAAGTCGATCATCGAGCACGGCCAGGTGATCCGTGGCTGGCTGGGGATCGAAGTGCAGCCGCTGAG CAAGGAACTGGCCGAGTCGTTTGGCCTGACCGGGCGCCCGGGCATCGTGGTCGCCGGGATCTTCCGCGATGGCCCGGCGCAAAAGGCCGGCCTGCAACTG GGCGATGTGATCCTCAGCATCGACGGCGAACCGGCCGGTGATGGCCGCAAGTCGATGAACCAAGTGGCGCGGATCAAACCGACCGACAAGGTCACGATCC AGGTGATGCGCAACGGTAAAGAGCTCAACCTGACGGCGGAAATCGGCCTGCGCCCACCGCCCGCGCCGGTGACGGAAGAGGAATAACCCACGTACTCCAG GTGCCCGTTCGCGGGCACCTGTAAGCACATATTTCAGAACCGAACCGCTGACATAATGACATGTTATATTGTTTCAATATCGCTATTGGAACGCTCTATC
DNA Sequence for Gene
>SU91_RS26640
ATGTTGCCTCGCACGTTTCCCCCCTTGGCCGGCCTGGCCTTGGGTTTGCTGCTGGACCCCGCCTGCGCCGAAGACACCCGCATTGAACTGGACGCCATCA GCGTCACCACCGACGCCTACGAATCCGCCACCGGCCCGGTCAACGGCTATCGCGCCACCCGCTCCGCCAGCGCAACCAAGACCGACACCGCGCTGCGTGA CATCCCGCAATCCATCAGCGTGATTCCCGCCAATGTGCTCAACGACCTGGGCAGCACCGACGTGGAACGCGCCCTGGAATTTGCCGGCGGCGTCTCCAAG CAGAACAACTTCGGCGGCCTCACCCTCTACGAATACAGCGTGCGCGGCTTCACTACGTCGGAGTTCTACCAGGACGGCTTCAGCGCCAACCGCGGTTACC CGAGCACGCCGGACGCCGCCAATCTCGAACGCATCGAAGTGCTCAAAGGCCCCGCCGCCAGCCTGTACGGGCGCGGCGATCCCGGCGGCACGGTGAATAT CGTCACCAAGAAACCCCAGCCCGACGCGTTCACCACCCTGCAAACCAGCGCCGGCAGTTGGGACCGCTATCGCACCGCGCTGGACGTGAACACCCCGCTC GACAGCGAAGGGCAACTGCTGACACGGGTCAATCTGGCGGTGGAAGACAACCATAGTTTCCGCGATCACGTAGACGCCAAGCGGGTGTTCGTCGCGCCGT CCTTCAGCTGGCAACTGGCCCCCGACACGCACCTGCTGGTGGAAAGCGAATTCGTGCGCCACCGCTCCACCTTCGACCGCGGCATCGTCGCGCCGCGCGG CATGTCGCGCTCCACCTTCCTCGGCGAGCCCAACGACGGCGACATCAACAACCACAACAACCGCCTCCAGGCCACCCTCGAACATCACCTCAACGACACG TGGGCCCTGCGCCTGGCCAGCCATTACAAACAAGGCAGCCTGTGGGGCGACGCTTCGGAAAACCGCGCGCTGAACAGCGACGGCCACACCGTCAACCGCC GCTACCGCGAACGCTCCATGGGTTGGCACGACAGCATCACCCAACTGGAACTGCGCGGTCTGTTCGACATCGGTCGTTGGCAACATGAGTTGCTGATCGG CACCGAGTACGAGGACTACCGCAAGAAGGAACGCGTGACCGCCATCGCCGGCAGCCCCTACGCGATCGACATCTACAACCCGGTCTACGGCCAGCCCAAA CCCGATGGCGAGCGCTCCGGCACTGACTTCTCCGAACAGGTAAAAAGCCAGGCACTGAACCTGCAAGACCAGATCGTCTTCACCGAACGCCTGCGCGGCA TGCTCGGCGCGCGCTTCGAGCACTTCGAGCAACACACCGACGACTTCACCCGTCATCACGCCAAGAGCCGCCAGACCCACGACGCCCTGACCCAGCGCGC CGGCCTGCTCTACCAGCTCACACCTGAAGTCGGGGTGTTCGCCAACGCCTCGACCTCATTCAAGCCGAACAACGGCCTGGACGCTGGCGGCAAATCCTTC AAGCCTGAAGAGGGTGTGGGGTATGAAGTGGGGATCAAGAGCGAGCTGTTCGACGAACGCCTCAGCGCCACCCTCGCCGCGTTCCACATCGAGAAGGAAA ACGTGCTGACCGTGGACCCCGCCACCGACACCCAACGCGCCATGGGCAAGGCACGCAGCCAAGGGTTTGACCTGCAACTGAGCGGGCAACTGAGCGAGGC AGTGCGCGTGATCGGCGCGTTCGCCTACATCGATGCCGAAGTGACCAAGGGCGATAAAGCCATCCCCACCGGCAGCCGCATTCTCGGCGTGGCCAAGCGC AGCGGCAGCCTGTTGGGCGTGTATGAATTCCAGGACGGCACGTTGCGCGGTTCAGACGTGGGCGCGGCGTTCACCTATGTCGGTGACCGCTCCGGTGAAG CCGGCGGCAGTTTCGAACTGCCCGCTTATCACACCGTGGACCTGCTGGCGCATTACAAAGCCACCGACAACGTCACCGTGGGCCTGAACCTTAACAACCT GTTTGATGAAAAGTACTACGAACGCTCCTACAGCAACTACTGGGTCAGCCCCGGTGAACCGCGCAACTTCACGGTCAGCCTCACCCTCAACCTGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CACGGTCAAACCTGTGGGAGGGGGCTTGCCCCCGATAGCGCTACAACAGTCACCTCACCCAGTGACTGGCAAACCGCTATCGGGAGCAAGCCCCTCCCAC ATTACAGTGCCACGGGGGCCCGCTCGCACAGGGTGTTAAGCGCCACCGCCCACTGCTCGCTGTCATTCAAGCACGGCACCAGCACCAACTCCTCGCCGCC CGCTGCGCGGAATTGCTCCCGGCCACGGTCGCCGATCTCTTCCAGCGTCTCGATGCAGTCGGCCACGAACGCCGGGCACATCACCAGCAGCTTTTTCACG CCTTGCTGGGCCAACGCTTCCAGGCGTGCCTCGGTGTAGGGTTCGATCCACTTCGCCCGGCCCAGGCGCGACTGGAATGCCACCGACCATTTGCCGTCCG GCAGCCCCATGCGCTCGGCAAAATTGCGGGCGACGCTGAAGCACTGTGCGCGGTAACACGTGGCAAGCACCTGCGGCGAAGCGTTGCGGCAGCAATCGGC
Amino Acid Sequence
>TonB-dependent receptor
MLPRTFPPLAGLALGLLLDPACAEDTRIELDAISVTTDAYESATGPVNGYRATRSASATKTDTALRDIPQSISVIPANVLNDLGSTDVERALEFAGGVSK QNNFGGLTLYEYSVRGFTTSEFYQDGFSANRGYPSTPDAANLERIEVLKGPAASLYGRGDPGGTVNIVTKKPQPDAFTTLQTSAGSWDRYRTALDVNTPL DSEGQLLTRVNLAVEDNHSFRDHVDAKRVFVAPSFSWQLAPDTHLLVESEFVRHRSTFDRGIVAPRGMSRSTFLGEPNDGDINNHNNRLQATLEHHLNDT WALRLASHYKQGSLWGDASENRALNSDGHTVNRRYRERSMGWHDSITQLELRGLFDIGRWQHELLIGTEYEDYRKKERVTAIAGSPYAIDIYNPVYGQPK PDGERSGTDFSEQVKSQALNLQDQIVFTERLRGMLGARFEHFEQHTDDFTRHHAKSRQTHDALTQRAGLLYQLTPEVGVFANASTSFKPNNGLDAGGKSF KPEEGVGYEVGIKSELFDERLSATLAAFHIEKENVLTVDPATDTQRAMGKARSQGFDLQLSGQLSEAVRVIGAFAYIDAEVTKGDKAIPTGSRILGVAKR SGSLLGVYEFQDGTLRGSDVGAAFTYVGDRSGEAGGSFELPAYHTVDLLAHYKATDNVTVGLNLNNLFDEKYYERSYSNYWVSPGEPRNFTVSLTLNL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site