Strain | Pseudomonas veronii strain R4 scaffold00001, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TGTACATCATTCTCGGCGTGCTGTACGAAAGTTTCGTCCACCCGCTGACGATCATTTCCACCCTGCCCTCGGCCGGTTTGGGCGCGTTGATCATGTTGTG GCTGCTGGGCCAGGACTTTTCGATCATGGCCTTGATCGGCCTGGTGTTGTTGATCGGCATCGTGAAGAAGAACGGCATCCTGATGATCGACTTCGCCCTC GAAGCCCAGCGGGTCAGAGGCCTGCCGCCGGAGGAAGCGATCTACGAAGCCTGCGTCACGCGGTTCCGGCCGATCATCATGACCACCCTCGCCGCCCTGC TCGGCGCCGTGCCGCTGATGCTCGGCGCAGGCCCCGGCGCGGAACTGCGCCAACCGCTGGGGATCGCGGTGGTCGGCGGCTTGCTGGTGAGCCAGGCGCT GACGCTGTTCACCACGCCGATCATATACTTGTACCTTGAGCGGTTTTTCCACCGGCCCACACCAACGCCCGCGTTGGCGACCACACATTAAGGCAGGGTC
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DNA Sequence for Gene |
>SU91_RS25650
ATGCGCGTACTGATCGTTGAAGATGAAGAAAAAACCGCGGATTACCTGCATCGCGGCCTGACGGAGCAAGGCTACACCGTCGACGTGGCGCGTGAAGGCG TCGAGGGTTTGCACCTGGCGCTGGAAAACGATTACGCGGTGATCGTGCTCGACGTGATGCTGCCCGGTCTCGACGGCTTCGGCGTGTTGCGTGCCCTGCG CGCGCGCAAGCAAACGCCGGTGATCATGCTCACCGCCCGCGAGCGCGTGGAAGACCGTATTCGCGGCCTGCGTGAAGGCGCCGACGATTACCTGGGCAAG CCGTTTTCGTTCCTGGAGCTGGTGGCGCGCCTGCAAGCCCTGACCCGCCGCAGTGGCGGGCACGAACCGGTGCAGGTGACGGTCGCCGACCTGTGGATCG ACCTGATCAGCCGCAAGGCCAGCCGCAACGGCGTGCGCCTGGACCTGACCGCCAAGGAGTTCTCGCTGCTCAGCGTATTGGCGCGGCGCCAGGGTGAGAT CCTGTCCAAGACCGCCATCGCGGAGATGGTCTGGGACATCAACTTCGACAGCGACGCCAACGTGGTCGAAGTTGCGATCAAACGCCTGCGCGCCAAGCTC GACGGGCCGTTCGAACAGAAGCTGCTGCACACCATCCGTGGCATGGGTTATGTGCTGGAGAACCGCGGTGTCAACTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CTCCATCGCGCTGCGCTTGAGCGGCATGTTCACCCTGGTGGCGCTGCTGATCTTCCTGTTGATCGGCGGCGCGCTCTATCAGCAGGTGGACCGTGGCTTG GGCCTGTTACCCGAGGCCGAACTGGATGCGCGCTACAGCGTGTTGGAGTCCTCGGTGAAGCGCTTCGGCACGCCGGAGCATTGGACCAAGATCAAGGCCA AACTCAAGTTGTTGGCCGAGGAAGACAAGCGCATCCGTTTCTGGGTGGTGAGCAGCGACCCGAACTACGAATATGGCAGCCCGGACGCACAGATCCGCGC CTTCGCCGCCGGCCCGACCGGCAAGCGCGACTTGCGCCTGGCCAATCACACCGAACCGTTCAAGGTGCTGGTGAGCCAGTTCCCCGCCCAGGACCAGCGC CCGCCGTTGCGCTTCATGATCGCCATCGACACCGAAAACTTCCGCGCCACCCAGCACCACTTGCTGGTGGCGCTGATCGGCCTGGCGTTTATCGGCGTGG
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Amino Acid Sequence |
>transcriptional regulator
MRVLIVEDEEKTADYLHRGLTEQGYTVDVAREGVEGLHLALENDYAVIVLDVMLPGLDGFGVLRALRARKQTPVIMLTARERVEDRIRGLREGADDYLGK PFSFLELVARLQALTRRSGGHEPVQVTVADLWIDLISRKASRNGVRLDLTAKEFSLLSVLARRQGEILSKTAIAEMVWDINFDSDANVVEVAIKRLRAKL DGPFEQKLLHTIRGMGYVLENRGVN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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