Strain | Pseudomonas veronii strain R4 scaffold00001, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAATGGCGAAGCGCTGTTCAGTGGCCTCTATCTCAATGAATTGCTGATCCGCCTGCTGCCGGCCGAAGACCCGCACCCGGCGGTCTTCGATCACTATGCC GCGACGCTGCTGGCCCTGGCCGAAGGCCGCCCGCTGGAGCCGCTGTTGCGCGCGTTCGAATGGCGCCTGCTCGACGACCTCGGCTATGGCTTCGAACTGA GTAACGACCTGCATGGCGAACCCATTGCCGCCGACGGCATGTATCGTCTGCAGGTCGACGCCGGCCTGGAGCGTGTGTACCTGCTGCAACCCGGCCTGTT CCAGGGCACCGAGCTGCTGGCCATGAGCGAAGCCGACTGGAGCGCCCCCGGCGCCTTGTCCGCCGCCAAGCGCCTGATGCGCCAGGCCCTGGCCGTGCAT CTGGGCGGGCGGCCGCTGGTCAGTCGCGAGTTGTTTCGAAAGCCCTGACAACCCCGTGTATGCTGTGCAGCGTTTCTTTCCCCTTTTCAGGAGCGCTTCC
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DNA Sequence for Gene |
>SU91_RS25160
GTGACCACCAGCAATCGCATTCTTCTCGGCGTCAATATCGACCACGTCGCCACGCTGCGCCAGGCCCGGGGCACCCGTTACCCAGACCCGGTCAAAGCCG CGCTGGACGCTGAAGAAGCGGGCGCCGACGGCATCACCGTACACCTGCGCGAAGACCGCCGTCACATCCAGGAGCGCGACGTGCTGCTGCTCAAGGACGT GCTGCAAACCCGCATGAACTTCGAAATGGGCGTCACCGAAGAAATGATGGCGTTCGCCGAGCGCATCCGCCCGGCGCATATCTGCCTGGTGCCGGAGACC CGCCAGGAGCTGACCACCGAAGGCGGCCTCGACGTGGCCGGCCAGGAAGCGCGGATCAAGGCTGCGGTGGAGCGTCTGTCGCAGATCGGCAGCGAAGTCT CGCTGTTCATCGACGCCGACGAGCGCCAGATCGAAGCCGCGCACCGGGTCGGTGCGCCGGCCATCGAATTGCACACCGGGCGTTATGCCGATGCGACCAC GCCGAGCGAAGTCGCCGCCGAGTTGCAGCGCATTATCGACGGCGTGGCCCAAGGTCTGCGTGAAGGCCTGATCGTCAACGCCGGCCATGGCCTGCATTAC CACAACGTCGAAGCCGTGGCGGCGATCAAGGGCATCAACGAGCTGAACATCGGCCACGCGCTGGTGGCGCATGCGCTGTTCGTCGGTTTCAAAGGTGCGG TCGCCGAGATGAAGGCCCTGATCCTGGCCGCTGCCAAACACTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AAGCAATGAAGATCCAATGTGGGAGGGGGCTTGCCCCCGATAGCGATGTGTCAGTCAACTCATCTATAGCTGACCCACCGCAATCGGGAGCAAGCCCCCT CCCACATTAGTCCTCGGTGTTTTTGGCATGCGGCAATGCGAAGTCTTACTGTTTAGCCGTCGCAGGTGTATCGTATCTGCCCTTTGCAGGCCCTCGGCCC GCAGCAGATACGTGAGGTTGTTGTGTCCCGATCCTTTTCCCGTCGACAAATCCTGGGTGGTCTTGCCGGCCTGGCCGTAGTGGGCGTCGGTGCCGGTGGC GGCTACCGCTACTGGCTGGGGAAAGTCGCCGAGGCCGAGGCGGGACACGACTACGAACTGATCGCCGCGCCCCTCGATGTGGAACTGGTACCGGGGCACA AGACCCAAACCTGGGCGTTCGGCCCGTCGGCCCCCGGCACCGAGCTGCGCGTGCGCCAGGGCGAATGGCTGCGGGTGCGTTTCATCAACCACCTGCCGGT
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Amino Acid Sequence |
>pyridoxine 5'-phosphate synthase
MTTSNRILLGVNIDHVATLRQARGTRYPDPVKAALDAEEAGADGITVHLREDRRHIQERDVLLLKDVLQTRMNFEMGVTEEMMAFAERIRPAHICLVPET RQELTTEGGLDVAGQEARIKAAVERLSQIGSEVSLFIDADERQIEAAHRVGAPAIELHTGRYADATTPSEVAAELQRIIDGVAQGLREGLIVNAGHGLHY HNVEAVAAIKGINELNIGHALVAHALFVGFKGAVAEMKALILAAAKH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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