Pseudomonas veronii R4, SU91_RS23605
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas veronii strain R4 scaffold00001, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGGTGGTGTTCCTCTGCCTCGCGGCGCTGTACGAAAGCTGGTCGATCCCGATCGCGGTGGTACTCGTCGTGCCGCTGGGTGTGGTGGGTGCGTTGATCG CCACCAGCCTGCGTGGCTTGTCCAACGACGTGTTCTTCCAGGTGGGCTTGCTGGTGACGGTGGGCCTGGCGGCGAAGAACGCCATCCTGATCGTGGAATT CGCCAAAGAGCTTCACGAACAAGGCAAAGGCATTGTCGAGTCGGCGATCGAAGCGTCGCGCATGCGTCTGCGACCGATCATCATGACCTCCATGGCGTTC ATCCTCGGCGTATTGCCGCTGGCGATCTCCTCGGGCGCCGGCTCAGGCAGCCAGCATGCGATCGGTACCGGCGTTATCGGCGGTATGATCACCGCCACGG TCCTGGCGATATTCTGGGTGCCCCTGTTCTTCGCAACCGTGTCCGCCATGGGCGAACGCAAAAAGACTGAACCCAAGCAAACTCCTAAAGAGGCTGGCCA
|
|
| DNA Sequence for Gene |
>SU91_RS23605
ATGAGCAAGTCGCTACTTTCCTTAGCCGTCACGGCATTCGTGCTCAGTGGCTGCTCGCTGATACCTGACTATCAGCGCCCCGAGGCGCCGGTGGCCGCGC AGTTCCCGCAGGGCCCGGCGTATTCGTCGGCCCAGGCTCCGAACCAGGCCGCCGCCGAACAGGGCTGGAAGCAGTTTTTCCATGACCCTGCCCTGCAACA GCTGATCCAGACCGCACTGGTGAACAACCGCGACCTGCGCGTCGCGGCCTTGAACATCGATGCTTACGCGGCGCAGTACAACATCCAGCGCGCCGACCTG TTCCCGGCCGTATCGGCCACTGGCAGCGGCAGCCGCCAGCGGACACCGGCACGCATGTCGCAAACCGGTAAAGCAGGCATCAGCAGTTCGTACTCGGCCA CCCTGGGCATCAGCTCCTATGAGCTGGACCTGTTCGGCCGTGTCCGCAGCCTGAGCGAGGAAGCGCTGCAGAAATACTTCGCAACCGAAGAAGCGCGGCG CAGCACCCAGATCAGCCTGGTGGCCAGTGTGGCCACCGCCTACCTGACCTGGCAGGCCGACAAGGAATTGCTCAAGCTGACCCAGGAAACCCTGGGCGCA TACGAGCAAAGCTACAAGCTGACCTCGCGCAGCAACGAAGTCGGCGTGTCCTCGGCCCTCGACCTGAGCCAAGCGCGCACCTCGGTGGAAAACGCCCGGG TGGCCCTGGCACGCTATACCCGCCAGGTGGCCCAGGACGAAAACAGCCTGACCCTGCTACTCGGCACCGGCCTGCCGGCGAATCTCGTCAGCAAGCCGCT GTCGGATAACCTGCTCAGCGAAGTGCCGACCGGGTTGCCATCGGACCTGTTGCAGCGTCGCCCCGACATCCTGCAGGCCGAGTACAACCTCAAGGCAGCC AACGCCAACATCGGCGCCGCCCGTGCGGCGTTCTTCCCGAGCATCAGCCTGACAGCCAACGCCGGGACCATGAGCCCGGACCTGGGCGGTCTGTTCAAAG GCGGCTCGGGCACCTGGTCGTTCGCCCCGCAGATCAACATCCCGATCTTCAACGCCGGCAGCCTGCGCGCCAGCCTGGACTACTCGAAGATCCAGAAAGA GATCAACGTGGCAAACTACGAGAAGGCCATCCAGACCGGCTTCCAGGAAGTTTCCGACGGCCTCGCCGCGCGTGAGACCTACAAGGAGCAGTTGGAGGCC CAGCGTGGTTTCGTCGCCGCCAACCAGGATTACTACCGCCTGGCCGAGCGTCGCTACCGCATTGGTGTCGACAGCAACCTGACGTTCCTCGACGCCCAGC GCCAGCTGTTCAGTGCCCAGCAATCGCTGATCACCGACCGCCTCGCGCAGTTGACCAGCGAGGTCAACCTGTACAAGGCCCTCGGCGGTGGCTGGAGCGA GCAAACGGCGAAGAACGAGCCGTTGAAAGAAGAAGCACCGGCGTTGAAGTTGTTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCACACCGCTGTAGACAAAACCGCTTCCCTCACTGGAAGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
|
|
| Amino Acid Sequence |
>multidrug transporter
MSKSLLSLAVTAFVLSGCSLIPDYQRPEAPVAAQFPQGPAYSSAQAPNQAAAEQGWKQFFHDPALQQLIQTALVNNRDLRVAALNIDAYAAQYNIQRADL FPAVSATGSGSRQRTPARMSQTGKAGISSSYSATLGISSYELDLFGRVRSLSEEALQKYFATEEARRSTQISLVASVATAYLTWQADKELLKLTQETLGA YEQSYKLTSRSNEVGVSSALDLSQARTSVENARVALARYTRQVAQDENSLTLLLGTGLPANLVSKPLSDNLLSEVPTGLPSDLLQRRPDILQAEYNLKAA NANIGAARAAFFPSISLTANAGTMSPDLGGLFKGGSGTWSFAPQINIPIFNAGSLRASLDYSKIQKEINVANYEKAIQTGFQEVSDGLAARETYKEQLEA QRGFVAANQDYYRLAERRYRIGVDSNLTFLDAQRQLFSAQQSLITDRLAQLTSEVNLYKALGGGWSEQTAKNEPLKEEAPALKLF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|