Pseudomonas veronii R4, SU91_RS20525
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas veronii strain R4 scaffold00001, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGCCCCGCCCAGCCAGCGGCGCGTCGATATACCTTCATTACGTATCCTGATGATTCTTGAGCACATGCCCGGTGAGCGCGTCCAATTCAACCTCCCATT CGATGCCGTCGACATCCTCCAGTTCGACCTCGTAGAGGTACTTGCCGTAGACCTCGTCCAGGTCGGTGTCCAGCAGGGTCGAACCGGGATGCAAGGCCAG GGCCGTGGCGTCCAGCTGATCGAAGGCGACAATAGTAACAGTGCCGGGCCCGCGGAGTGACTTGTCGGGGTCGGCTGCCAGGGCCTGTGCCGCCAAAGAG GCAATGAACCCGGCGGCGACCAGCATTGTAAGACGCTTCATGCTGAGTCTCCGTTTCACGATATTTGTCCTACACCCGTCAGCGTATCCGCGGCAACTTA ACTGAAACTGAATTGCCACCATGGCAATTCGCGTCACCCGCGTTTTCCTTCATCCGGCGAGATTTTCTATACTGCCCCGCTCGCTTCAACAGAGACCGGT
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| DNA Sequence for Gene |
>SU91_RS20525
ATGACAGCCATCCACATCAAGTTTCCCGCCCTGACCCTCAAGGCCGGCAAACGCGCCTTTGCGCGCATTCGCGAGCAAGGCCTCAAGCCTGCCGATGTCG GTATCCTTCCCGGTGCGGCAGGCGGGCCCAAGGCCTTGGGCATCCAGGGCCTGGACCTGGCGCTGTTCGGCGAGTGGCTGCCCCGCGCGCCACGCGAACG TGCGCTGATCGGTGCCTCCATCGGTTCCTGGCGGTTTGCCAGCGCCTGCCTGCCCGACCCGGTGCAAGGCCTGCTCGACCTCGGCCGCCTGTACAACGAA CAACGCTTCGCCAAAGGCGTGACCATGGCCGAGGTCAGCCAGAGCTGCCGGCGCATGCTCGATGACCTGCTGGCCGGGCGCGATGCGCGGGTGCTGGACA ACCCCGGCTATCGGCTGAACATCATGGTGGTCAAGAGCCACGGCCTGCTCGCCGATGACCACCGCGGGCGGCTGGGCCTGGGCCTGTCGTCGGTGATTGC CGACAACCTGCGCGGCCGTGCGCGGCTGTCGCGGCATTTCGAACGGCTGATCATCCATGACCCGCGCCAGGCGCCGCCGGTGCATGCGCTGCGGGATTTT CCGTCGCGCTTCCTCGACCTGAACCTGGGCAACCTGCGCCAGGCGCTGCTGGCGTCCGGCTCGATTCCTCTTGTGATGCAAGGCGTGCGCGACCTGCCTG GCGCCGGTGCCGGCACCTACCGCGACGGCGGCCTGCTGGATTACCACCTCGACCTGCCCTACCACGGCGATGACATCGTGCTGTACCCGCACTTCACCGA CCGCGTCATCCCCGGCTGGTTCGACAAGGGCCTGCCGTGGCGACGCAGCAATCAACAAGGCTTGCAGGACGTGTTGCTGCTGGCGCCGTCGAAGGACTAC CTGGCCCGCCTGCCCCACGGCAAACTGCCGGACCGCAGCGACTTCAAGCGCTTTCTGGGCGATGACGCGACTCGCAACAAATACTGGCAAACCGCAATGA GCGAGAGCCGGCGCCTGGGCGATGAGTTTCTGCACCTGGCCGACCAGGGTGGCCTGGGCGAGCGCTTGCAGGCGCTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCAGCGGTATGCGCGAGGCGCGATGTAGCTGTTAAACTCGCCGCCTGCCAGAAACCTGACCGAGCTGAAAAATACTGTGGAAATCTTCAAGGAATTTAC ATTCGAATCCGCCCACCGCCTGCCCCACGTGCCAGACGGCCACAAATGCGGGCGCCTGCATGGGCATTCGTTCAAGGTGGCGATCCACCTGAGCGGCGAC CTGGACCCCCATACCGGCTGGATTCGCGACTTCTCGGAGATCAAGGCGATTTTCAAGCCGCTCTATGAACGCCTCGACCACAACTACCTGAACGACATCC CCGGCCTGGAAAACCCCACCAGCGAAGTACTGGCCAAGTGGATCTGGACCGAATTGAAACCCCTGCTGCCCGAACTCAGCGCGATTCGCATCCATGAAAC CTGCACCAGCGGCTGCATCTATCGCGGCGAGTAACCCTCACGTCAACGCCCTGCGGGAGCGCCCCATGGAAAACACCTGGCTGGCCCAGGCCAAACGCTT
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| Amino Acid Sequence |
>hypothetical protein
MTAIHIKFPALTLKAGKRAFARIREQGLKPADVGILPGAAGGPKALGIQGLDLALFGEWLPRAPRERALIGASIGSWRFASACLPDPVQGLLDLGRLYNE QRFAKGVTMAEVSQSCRRMLDDLLAGRDARVLDNPGYRLNIMVVKSHGLLADDHRGRLGLGLSSVIADNLRGRARLSRHFERLIIHDPRQAPPVHALRDF PSRFLDLNLGNLRQALLASGSIPLVMQGVRDLPGAGAGTYRDGGLLDYHLDLPYHGDDIVLYPHFTDRVIPGWFDKGLPWRRSNQQGLQDVLLLAPSKDY LARLPHGKLPDRSDFKRFLGDDATRNKYWQTAMSESRRLGDEFLHLADQGGLGERLQAL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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