Pseudomonas veronii R4, SU91_RS20360

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas veronii strain R4 scaffold00001, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCACGTTCACATGGGGGTAACGCGCGCGGAATATCTTCAGGATCGGCGGCAGCAGGTTGCCCGCAAACGACGGCATCGCCGCCACCGTTACGCGCCCGCG CTGCAGGGTGAAGCGCTGGCGCAGTTCATCCTCGGCGTTGTCCCAATCGGCAATCAGCCGACGCGCCAGCGGCAATAAGGATTCCCCTTCAGGGGTCAGC GCGACATTCCGTGTATTGCGGCTGAACAAGCGCCCGCCCAGCCCTTCTTCCAGACCTTTGATGGTCAGGCTCAGCGCCGACTGAGAGAGGTGCAGGCGCT CGCAGGCGGCGGCAAAACTCAGGCTCTGCGCCACAGCCAAAAAGGCACGCATCTGTTTGACGGTCATGACATTACTCCGGACGACGGCTCGACTATGCAG TTTTTTAAATCAATCAACCTTAAAAAACAACTTAACAAATCAATCCGTCGGCGCAACACTCGAGGCATTGGCTGGCCCACTAACAATAAAAGAGGTGCAT
DNA Sequence for Gene
>SU91_RS20360
ATGGCAGGTTTCGATAAACGCGTGGCGTCCTATGAAGAAGCCCTCGCAGGCCTGGAAGATGGCATGACCGTACTCGCTGGCGGCTTTGGCCTGTGCGGCA TTCCGGAAAACCTCATCGCCGAGATCAAGCGCAAAGGCACCCGCGACCTGACCGTGGTTTCCAATAACTGCGGCGTCGACGGCTTTGGCCTGGGCGTGCT GCTGGAACAAAAGCAGATCCGCAAAGTGATCGCGTCTTATGTGGGCGAAAACGCCCTGTTCGAGAAGCAACTGCTCAGCGGCGAAATCGAAGTGGTGCTC ACCCCCCAAGGCACCCTGGCGGAAAAAATGCGCGCCGGCGGTGCTGGCATTCCGGCCTTCTTCACCGCCACCGGCGTCGGCACCCCGGTGGCCGAAGGCA AGGAAACCCGTGAATTCAACGGTCGCCCGTACCTGATGGAAGAATCCATCACCGGCGACTTCGCCATCGTCAAAGGCTGGAAAGCCGACCACTTCGGCAA CGTCATCTACCGCCACACCGCCCAGAACTTCAACCCGCTGGCCGCCACCGCCGGCAAGATCACCGTGGTCGAAGTCGAGGAAATCGTCGAACCGGGCGAG CTGGAACCGTCGCAGATCCACACCCCTGGCATCTACGTCGACCGGATCATCTGCGGCACCTTCGAGAAGCGCATCGAACAGCGCATCGAACAGCGCACCG TCCGCAAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCCCTCCAGCCCAAAGAGAACAAGAGGAACAGCACAATGGCTCTCACCCGCGAACAAATGGCTCAACGCGTCGCCCGCGAAATGCAGGACGGTTTCTACG TCAACCTGGGCATCGGCATTCCGACCCTGGTGGCCAACTACATCCCGGAAGGCATGGAAGTGATGCTGCAATCGGAAAACGGCCTGCTCGGCATGGGCCC GTTTCCCACCGAAGACACCATCGATGCCGACATGATCAACGCCGGCAAACAAACCGTGACCGCGCGCATCGGCGCCTCGATCTTCTCCTCCGCCGAGTCC TTCGCAATGATTCGCGGCGGCCATGTCGACCTCACCGTGCTCGGCGCGTTTGAAGTGGACGTACAGGGCAACATCGCCTCGTGGATGATCCCGGGCAAGC TGGTCAAGGGCATGGGCGGCGCCATGGACCTGGTGGCCGGCGCGGAAAACATCATCGTGATCATGACCCACGCCTCCAAGGACGGTGAGTCCAAATTGCT
Amino Acid Sequence
>succinyl-CoA:3-ketoacid-CoA transferase
MAGFDKRVASYEEALAGLEDGMTVLAGGFGLCGIPENLIAEIKRKGTRDLTVVSNNCGVDGFGLGVLLEQKQIRKVIASYVGENALFEKQLLSGEIEVVL TPQGTLAEKMRAGGAGIPAFFTATGVGTPVAEGKETREFNGRPYLMEESITGDFAIVKGWKADHFGNVIYRHTAQNFNPLAATAGKITVVEVEEIVEPGE LEPSQIHTPGIYVDRIICGTFEKRIEQRIEQRTVRK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site