Pseudomonas veronii R4, SU91_RS17260
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas veronii strain R4 scaffold00001, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCAAACCCCGGCATTGCTGCGGCTGTGCCCGGTGCAGGCTTACAGTGAATGGCTCAGCGCTTCGGCGCTGGTCCGCGGCCCGGTGTTTCGCGGGATTGAC CGCTGGGGCAACCTGGGCGAGGCGGGGTTGCACCCCAACAGCGTGATCCCGCTGTTGCGCCAGGCCTTGGAGCGTGCGGGCATTCCGGCCGAGCACTACA CCAGCCACTCCCTGCGTCGGGGCTTTGCCACGTGGGCCCATCGCAGTGGTTGGGATTTGAAGTCGTTGATGAGTTACGTCGGCTGGAACGACATGAAATC CGCCATGCGCTATGTTGAAGCGACACCCTTTCTAGGCATGACCCTGGCAACTGCGCCGCTGATTTGAGGTTTCTTCTATTAATACTGTCGGCTGATAGAG AAAGCCAATCGCGAGCATCAGGTTTGCCAATGAGCCATCGGCCAAGAGAGTGGGTAGGATTCACTTCATCAACTTACCAACCCCTGACGGAGAGTCAACG
|
|
| DNA Sequence for Gene |
>SU91_RS17260
ATGCCTATCATCAACAGCCAAGTAAAACCGTTCAAAGCGACCGCCTACAAAAACGGCAACTTCGTAGACGTGTCTGACGCTGACCTGAAAGGCAAATGGT CCGTAGTGTTCTTCTACCCGGCCGACTTCACCTTCGTTTGCCCGACCGAGCTGGAAGACCTGGCTGACAACTACGCCGAATTCCAGAAGCTGGGCGTCGA AATCTACAGCGTTTCCACCGACACCCACTTTGCCCACGCTGCCTGGCACAACACCTCGCCAGCCATCGGCAAGATCCAGTACACCATGATCGGCGACCCA ACCCTGACCATCTCCCGCAACTTCGACGTGCTGATCGAAGAAGTCGGCCTGGCAGACCGCGGTACTTTCGTGATCAACCCAGAAGGTCAGATCAAGATCG TTGAACTGAACGACGGCGGTGTTGGTCGTGACGCTTCCGAGCTGCTGCGCAAAATCAAAGCCGCTCAGTACGTCGCTGCCCACCCAGGCGAAGTGTGCCC AGCCAAGTGGAAAGAAGGCGAAGCCACCTTGGCTCCGTCCCTGGACCTGGTCGGCAAGATCTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GTCTGTGACACATCAAGGGCGGGATTCCGCACCTAAGTAAGCTGCAACCGCCCTCAAAAACGCCCGGGCGAGATTCGCTCGGGCGTTTTTTTTACCAAAT TCAAAGGAATCGCCCGTATGTTGGACGCCAATCTTAAAGCTCAGTTGAAGTCATACCTGGAACGGGTCACCCAGCCGATTGAGATCGTCGCCTCCCTCGA TGACGGCGCGAAATCCCAGGAAATGCTTGCACTTTTGCAGGACGTAACCAGCCTCACCACGCTGATTACCCTGAAAACCGAGGGTGACGATGCACGCAAG CCCTCGTTTTCCATCAACCGCCCGGGTGCCGAGATCAGCCTGCGTTTTGCCGGCATCCCCATGGGGCATGAATTCACTTCGCTGGTGTTGGCCCTGCTGC AAGTCGGTGGCCACCCGTCGAAGGCCAGTGTCGAAGTGATTGAACAGATTCGCGCGCTCAAAGGCGAGTTCAGCTTCGAGACTTACTTCTCGCTGTCATG
|
|
| Amino Acid Sequence |
>alkyl hydroperoxide reductase
MPIINSQVKPFKATAYKNGNFVDVSDADLKGKWSVVFFYPADFTFVCPTELEDLADNYAEFQKLGVEIYSVSTDTHFAHAAWHNTSPAIGKIQYTMIGDP TLTISRNFDVLIEEVGLADRGTFVINPEGQIKIVELNDGGVGRDASELLRKIKAAQYVAAHPGEVCPAKWKEGEATLAPSLDLVGKI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|