Pseudomonas veronii R4, SU91_RS16985

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas veronii strain R4 scaffold00001, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGCGCCTGGACCGCCTGGACTCGGCACGTATCGGCAGCTCCCGTGCGATCACCCAGTTGATCCTGAACCTGGTGGAAGGTACGCCGATCCGCCTGTTCG ACGGTGGCGAGCAGAAACGCTGCTTCACCGACATCGCCGACGGCATCGAAGCCCTGGCGCGCATCATCGATAACGACAACGATGTGTGCAACGGCCAGAT CATCAACATCGGCAACCCGGAAAACGAAGCGAGCATCCGCCAGTTGGGCGAAGAACTGCTGCGTCAGTTCGAAGCTCACCCGCTGCGCAGCAACTTCCCG CCGTTCGCCGGTTTCCGCGACGTGGAAAGCAAGGCGTTCTACGGCACCGGTTACCAGGACGTGGCCCACCGCAAACCAAGCATCGAAAACGCCAAGCGCC TGCTGAACTGGGAGCCGACCGTGGAGATGAGCGAAACCATCGGCAACACCCTGGATTTCTTCCTGCGTGAAGCCATGCTCGAAATCTCGGACAAGCGCTG
DNA Sequence for Gene
>SU91_RS16985
ATGCAGGCAGGTCTTCGCATTGATGTCGACACCTACCGCGGCACCCGCGAAGGCGTGCCACGGTTGCTCGAGTCCCTGGATGAAGCCGGGGTAAAAGCAA CGTTCTTCTTCAGTGTCGGGCCGGACAATATGGGGCGCCACTTGTGGCGCCTGATCCGCCCGCAATTTCTGTGGAAGATGCTGCGTTCCAACGCCGCCGG CCTGTATGGCTGGGATATCTTGCTCGCCGGCACCGCCTGGCCGGGCAAGCCGATCGGCCGCGACCTGGGGCACTTGATGCGCCAGGCCAAGGCCGCGGGG CATGAAGTCGGCCTGCACGCCTGGGATCACCATGGCTGGCAGGCCAACGCCGGACGTTGGAGCGACGCACAGTTGATCGAGCAGGTCCGACGCGGTGTGG ACACCTTGAGCGACATCCTCGGTGAACGTATCGACTGTTCAGCGGCCGCCGGTTGGCGTGCCGATGAACGCGTGGTGCAAGCCAAGCAAGCCTTCAACTT TCGCTACAACAGCGATTGCCGGGGCACCAGCCTGTTTCGTCCGACCCTGGCCGATGGCAGCGCGGGCTCCCCACAGATTCCGGTAGACCTGCCGACCTTC GACGAAGTCGTCGGGCCGGTGGTGGCTGCCAAGGATTTCAACGGGTTCATTCTCGACCGCTTCGCAGAGTCGAAGCTAAACGTCTACACGATCCACGCAG AAGTAGAAGGGATTCTGATGGCCAACGATTTTCGCCAGTTGCTCGCCCAGGCAGGGCAGCGCGGCATCCATTTCAAACCGCTGGGCGATCTGCTCCCGGC GGACGTCTCCACCCTGCCCCAGCAACAACTGGTGCGCGGCGCCCTGAGCGGCCGTGAGGGTTGGCTCGGAGTGCAGCAGGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCCGCCGTTGGGCGCTGCCCCTGCTGCTGTTGGCATTCGGCGCATTTTATCTGTTACCCCTGGCCACCCATGGCCTGTGGATTCCGGATGAAACCCGCTA TGCACAGATCAGCCAGGAAATGCTGCTGACCGGCAAATGGGCGTCGCCGCACTTTATGGGCATTCGCTATTTCGAAAAACCGGCTGCCGGTTACTGGATG ATCGCGCTGGGCCAGGCGATCTTCGGGCAAAACCTGTTCGGCGTGCGCTTTGCGTCGGCCTTGAGCACCGGGCTCAGCATTCTGCTGGTGTACCTGGTGT CGCGCCGGTTGTGGAATGACCCGCACAAGAGCCTGGTCAGCACAGTGCTGTACATGAGCTTTGTCAGCGTCGTGGCGCTGGGCGGTTATGCCAACCTGGA CCCGCAGTTCACCTTCTGGGTCAACCTGACCGGCGTGGCGCTGTGGTTTTGCTTCGACAGCACCACCCGCAACGGTCGCGTCGGGTCCTGGGCGCTGCTT
Amino Acid Sequence
>4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase
MQAGLRIDVDTYRGTREGVPRLLESLDEAGVKATFFFSVGPDNMGRHLWRLIRPQFLWKMLRSNAAGLYGWDILLAGTAWPGKPIGRDLGHLMRQAKAAG HEVGLHAWDHHGWQANAGRWSDAQLIEQVRRGVDTLSDILGERIDCSAAAGWRADERVVQAKQAFNFRYNSDCRGTSLFRPTLADGSAGSPQIPVDLPTF DEVVGPVVAAKDFNGFILDRFAESKLNVYTIHAEVEGILMANDFRQLLAQAGQRGIHFKPLGDLLPADVSTLPQQQLVRGALSGREGWLGVQQA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site