Pseudomonas veronii R4, SU91_RS14830

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas veronii strain R4 scaffold00001, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGTGGGGGCTTTGGTTTCCGTCGCCGGGCGGCTAGGCGCAGCCTGGCGTTGCGGATAGCGATTGCCGATGCCGCCGTTTTCCAGGGTCGGCGTGCGCGTG GTCGGCCCGGTCTGGATGCCGCGAATCGCCGGTGCATTGGGCTGGGTGCCCTGCATACTGTTGGGATTGGCCCGGTGGATCGGGCTATTGTTGGCGTCAT TGCTGCCGGGCAGGTTTTGCGCCTGGGCACTGGCGCAAAGTGCCAGGCCTAGCGCCAACGCTGCAAGATGTCGCACACAGGTGATCATGACAAAGCCTCT TGGGACGAGGAGTACGTGCTTTCGATACCACGCTACGCTTTGGGTTCGCCTTTGGTAACTAAATCGTTTCTCATCAGATGTAACACGTTCTGTCCGAGCA TCCGCGCACCGCAACTTCCACGCCCGCGATCGCACGGGTGCAAGGTGTGTAAAAAGCCAGCGAAAAGGCCTCTTGAGCCGACCAAGGTAGGGAGCACGAT
DNA Sequence for Gene
>SU91_RS14830
ATGGCAAAGCCCCTGAGCGAATACAACCGCAAACGCGACTTCAAGATCACCGCCGAACCTTCCGGCGCCGCGTCGGGCGCGCAGCGCAATGCATCGGCGC TGACGTTCGTGATCCAGAAGCACGACGCACGCAATCTGCACTACGACTTGCGCCTTGAGCTCGATGGCGTGCTCAAGAGCTGGGCGGTGCCCAAGGGCCC CAGCCTCGACCCCAGCCAGAAACGCCTGGCGGTGCAAGTCGAAGACCACCCCTTGAGCTACGGCAGTTTCGAAGGCAGCATTCCGGCCGGCCAATACGGC GCCGGCGATGTGATCGTCTGGGACCGTGGCATTTGGCACCCCCACGACGATCCACAAACCGCCTACGCCGCCGGCAAACTGGAATTCACCCTGGCCGGCG AAAAACTCTCAGGCGATTGGGTCTTGGTACGCACCCACCTCAAAGGCAGCGGCGACAAGGAACGGTGGCTGCTGATCAAGGAAAACGACCGGCACGCCCG CCCGGCCAGCGACTACGACATCACCGAAGCCCAGCCGCAAAGCGTGCTCAGCGGTGCCTGCGTGGGGAACGCCAGGCCCACGCCCGCGCCGCAAAAGACC GCCGCGTCGGTCACCCTCGCCGGTGTGCAGATCACCCATGCCGAGCGCGTCATCGATCTCGCCAGCGGCACCCGCAAGCTGCAACTGGCGCAGTTTTACC AGAGCATCAGCGAATGGCTGCTGCCCTTCCTGCGTCACCGCCCCGTTTCCTTGCTGAGGGCGCCGGAGGGCATCGACGGCGAGCAATTTTTCCAGAAGCA CTCGGAGCACCTGGCGATTCCCCATATCAAGCAACTGGACCAGCGCCTGGACCCTGACCATGCGCGCCTGATGCAGATCGACAGCCTCGCCGCCCTGATC GGTGCGGTGCAGATGGGTACCGTCGAACTGCACACCTGGGGTGCCACCTCGGACAAGATCGAAACCCCGGACCTGTTCGTCCTCGACCTCGACCCCGATC CGGCCTTGCCGTGGAAAGCCATGCTGGAGGCGGCGCAGTTGACCTTGTCGGTGCTCGACGAGTTGGGCCTGCAAGCCTTCGTCAAGACCAGCGGCGGCAA AGGCCTGCACCTGATGATCCCGCTGGCGCGCCGCGATGATTGGGCCACCGTGAAAGCCTTCGCCAAAGCGATCGCCCAGTTCATGACCCAACGCCTGCCG GAACGCTTCACCGCCACCTCCGGGCTGAAGAATCGACAGGGCAAGATCTTCATCGATTACCTGCGTAACGCGCGCGGTGCCAGTACGGTGGCGGCCTATT CAGTGCGCGCACGCCCCGGCCTGCCGGTGTCGGTGCCGGTCAGGCGCGAGGAGTTGAAGGGGTTGCGCGGTGCCCAGCAGTGGACGGTCGCCAACCTGCA ACAGCGGTTGCAGGGTTTGAAGGGCGACCCGTGGGCCGGTTATGCCAACAGGCAGAGGCTCAGCAAACAGATGTGGGACACGTTGGGCGCGACGCCACCG CAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCGCGCCACGTCGAGGTTCAGATCAGGATGAAGATCAGCGCAAGCACCGCGAAGATCGCCCACTTTTCCAGGTAGTAGCGCGTGCGGTTACGCTTCTTG AGTTCCTTGCCGCGCAGGCGGATTTTGTACAAGCGGCTAAACGCACGGTTCAGCCCGCCGGTCTTGTCGCCCGCGTCGTTCGGCGCGCCGGCGGCGGCCA TCACCGTGCGGCTGAACCAGCGGTTGAACGCGGCCGCCCAGCGGTACTTCATCGGCCGCTCGACGTCACAGAACAGAATGATGCGGTTCTTCTGGGTGGC GTTTTCTGCGTAGTGGATATAGGTCTCGTCGAACATCACCGGTTCGCCGTCGCGCCAGGAGTAGTTCTCGCCGTCCACATTGATGTAGCACCCCGGATCG TTGGGGGTATCCAGGCCCAAGTGGTAGCGATAGGAACCGGCGTAAGGGTCGCGGTGGCGCACCAGCTTGGAGCCCGGCGGCAACTCGGCGAACATCGCGG
Amino Acid Sequence
>ATP-dependent DNA ligase
MAKPLSEYNRKRDFKITAEPSGAASGAQRNASALTFVIQKHDARNLHYDLRLELDGVLKSWAVPKGPSLDPSQKRLAVQVEDHPLSYGSFEGSIPAGQYG AGDVIVWDRGIWHPHDDPQTAYAAGKLEFTLAGEKLSGDWVLVRTHLKGSGDKERWLLIKENDRHARPASDYDITEAQPQSVLSGACVGNARPTPAPQKT AASVTLAGVQITHAERVIDLASGTRKLQLAQFYQSISEWLLPFLRHRPVSLLRAPEGIDGEQFFQKHSEHLAIPHIKQLDQRLDPDHARLMQIDSLAALI GAVQMGTVELHTWGATSDKIETPDLFVLDLDPDPALPWKAMLEAAQLTLSVLDELGLQAFVKTSGGKGLHLMIPLARRDDWATVKAFAKAIAQFMTQRLP ERFTATSGLKNRQGKIFIDYLRNARGASTVAAYSVRARPGLPVSVPVRREELKGLRGAQQWTVANLQQRLQGLKGDPWAGYANRQRLSKQMWDTLGATPP Q
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site