Strain | Pseudomonas veronii strain R4 scaffold00001, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCTGTTTCGCCGCAACCGCAACGATCGATACATCGCATGACCCTCGTGGTCGGCCTGGGCTGCCAGCGCGGCTGCGAGTTTCAAGCCCTGCTGGACCTG CTGGACGCCGCCCTCGCCGAGGGCGGTATCGAGCGCCATCGCATCACCGCCCTGGCCAGCCTTGATCGCAAGCAGGATGAACCGGGCTTGCTGGCCCTGG CCCAATGGCTGAACCTGCCGCTGCACTGCTTCAGCGCGGCGCACCTGGCGATGTATGACGACCGTCTGAGCCACAGGTCCGCCGTCGCCTTTGCCCATAC CGGTTGTTACGGCATCGCCGAAAGCGCCGCCCTGGCCCTGGCCGAACAACTCGGCGGCGCCCCTGCGCGCCTGTTGGTCCCGCGCAAAAAATCCGCCCGG GCCACCTTGGCATTGGCCTGCGTCGACTGAAACCGCGATAATCGCCGCTTCCGATCATGAGCGTTCCTCATGCTCGCGCGTTTTTTCACAGGATTTGTCC
|
|
DNA Sequence for Gene |
>SU91_RS14110
ATGACCGTCTACTTCATCGGCGCCGGCCCCGGCGACCCGGAATTGATCACCGTCAAAGGCCAGCGGCTGATCCGCAGTTGCCCGGTGATCATCTATGCAG GGTCGCTGGTGCCGGCGGCGGTACTGGAGGGGCATCAGGCCGAACAGGTGGTCAACAGCGCCGAACTGCACCTGGAACAGATCATCGAGCTGATCAAGGC CGCCGATGCCAAGGGCCAGGATGTGGCGCGAGTCCACTCCGGCGATCCAAGCCTGTACGGCGCAATTGGCGAACAGATCCGCCTGTTGCGCGAGTTGGGC ATTGCGTTCCAGATCATTCCCGGCGTCACCGCCGTGGCCGCCTGCGCGGCGCTGCTGGAGACTGAACTGACCCTGCCGGACATCGCCCAGAGCGTGATTC TCACCCGCTACGCCGATAAAACCCGCATGCCCGCCGGTGAAGACTTCGACAGCCTGGCCCGCCACGGCACGACCATGGCGATTCATCTGGGGGTCAATCA CCTGGAGAAGATCGTCGCCGAACTGCTGCCGCACTATGGCGCGGATTGCCCGATTGCCGTGGTACACCGCGCGACCTGGCCGGATCAGGATTGGGCTGTC GGCACCTTGGCGGACATTGCCGAAAAAGTCGCGGCCAAAGGCTTCAGGCGCACAGCGCTGATTGTGGTGGGTCGGGTGCTGGCCAGTGACAGTTTCAGCG CGTCGTCGCTGTATCGGGCCGGGCATGCACACCTGTACCGCCCCTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TCAAAAACATCAAAAAACAAACATAAAACACTGATTTAACTAAACAAACACAAAAAAATGTGGGAGGGAGCTTGCTCCCGATAGCGGTGTATCTGTTGCT TGATAAGTCGACTGACCCGCCGCTATCGGGAGCAAGCTCCCTCCCACACTTAATGTTCAGCGTTAGGTAGGTCGCGTAAGCATCTGAATTTTAAGCATAA AAAACGGCGCTCACGGGGCGCCGTTTTTTTGCTCGCAGCGAACACCTGACTCAGTAGTAGGCGTTTTCTTTCTGCGTATGGTCAGTCACATCGCGGACGC CCTTGAGCTCCGGAATGCGCTCCAGCAAGGTACGCTCGATGCCTTCACGCAGGGTCACATCCGCCTGGCCGCAGCCCTGGCAGCCACCGCCGAACTTCAA TACGGCGATACCGTCATCCACCACGTCGATCAAGCTGACCTGCCCACCGTGGCTGGCCAGCCCAGGGTTGATCTCGGTTTGCAGGTAGTAATTGATGCGC
|
|
Amino Acid Sequence |
>precorrin-4 C11-methyltransferase
MTVYFIGAGPGDPELITVKGQRLIRSCPVIIYAGSLVPAAVLEGHQAEQVVNSAELHLEQIIELIKAADAKGQDVARVHSGDPSLYGAIGEQIRLLRELG IAFQIIPGVTAVAACAALLETELTLPDIAQSVILTRYADKTRMPAGEDFDSLARHGTTMAIHLGVNHLEKIVAELLPHYGADCPIAVVHRATWPDQDWAV GTLADIAEKVAAKGFRRTALIVVGRVLASDSFSASSLYRAGHAHLYRP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|