Strain | Pseudomonas veronii strain R4 scaffold00001, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TAACTCAATTGCGCCTTGAACGATGAGGTGATCGTCGGCGCCGATTGCAGCCGGAAGTAGGCATCCTGCACGACGTCTTCGGCCCGGGAGCGGCAGCCGG TAATACGTGCTGCGATCTTTACCAGAATCAGCCGATTATCGACGAATGCCTGGAGCAGCGGTGAGTCGCACCTGCCTGTGGATACTTGTTCCGTCATGGA AATCACCTTGATCGCAAAAGAGGTTAGGGGAGGGCGTCCGTGCTGAGGCCTCCTACACATCGGGCAACAAATTATGCTGAATGATAATTATTGTCAAATG AGAAGTCTGACTGATTTTGTCCGTGGGCTGAAGGTGTGAACCCCGTCTCGCTCGTCCTCGACGACTAATTATTTGGCGGCGCCGTCCGTTCTTCTGGGTG ACAGGTTCGTTGGTAAAACGGCCAAGGATCAGCACCCGCAGGAGGGCAAGATGGGTTTTTATCGTGCATACGGCGCGTTTCAGGTGAGGGGCGTCGAGCG
|
|
DNA Sequence for Gene |
>SU91_RS09435
ATGAGCGCACCGACTCGACTGCGCCTGTTCTGCCTGCCTTATTCGGGGGCCAGCGCCATGGTGTACGTGTGTTGGCGGCGTGTTCTGCCGGACTGGTTGC AGGTGTGCCCGCTGGAGTTGCCGGGGCGTGGCATGCGGATGGACGAGCCGTTGCAACGCGACATCGGCGCCTTGGCCGCGCAGTTGGCGGATGAAATCAG TCGTGACCTGAACGGCCCCTACGCGTTGTTCGGCCACAGCCTTGGCGGCCTGCTGGCGTTCGAGCTGGCGCACGCGCTCAAAGCGCGCAACGTGCCTGCG CCGCTGGCGCTGTTTGCGTCCGGCACCGCCGGCCCGGCGCGGCGCGACGTCAGCGAGTACGCCCGCGAAAAGACCGATGAGCAACTGATCGCCCGCTTGC GCGACCTGCAAGGCACCGCCGAAGCAGCCCTGGCCAACCGCGAATTGATGCAGTTGATGCTGCCGATCCTGCGCGCCGACTTCCTGTTGTGCGGCAGCTT CGCCTACGGCCGACGCGAGCCGCTGGGCATGCCGATCCATGTGTTCGGCGGCAAGCAGGACAGCGTGCGCGCCGACCAGTTACTCGACTGGCAGGCAGAC GCCGCCAGCGGTTTTTCCCTGGACCTGTTCGACGGCCACCACTTCTTTCTGGTGCAGCACGAAAGCGCGGTGCTGCGCTGTGTGCGGCGCTACGCCGAGG AACACCTGGCGCGCTGGCGCAATGGCGCGGCGCGGCGACTGACCGCCGGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
ACCCTTCCCGATTTTCCCGTAAGCCGATTTCAGGCAGGAACCCCCATGATGGACGCCTTCGAACTTCCCCGCACCCTGGCTCAGTCCCTTCAACGCCGCG CCGCGCAGACTCCGGAGCGGATCGCTCTGCGTTTCCTCGCTGAGTCCGCCGAACACAACGTGGTCCTCAGCTACCGCGACCTCGACCGGCGCGCCCGTGC CATCGCCGCCGCCCTGCAGGCCAACGCCGACCTGGGCGACCGTGCCGTGTTGTTGTTCCCCAGCGGGCCGGACTATGTGGCGGCGTTCTTCGGCTGCCTG TACGCCGGGGTGATCGCGGTGCCGGCCTATCCGCCGGAGTCCGCTCGTCACCATCACCAGGCGCGCTTGCTGTCGATCATCGCCGACGCCGAGCCGCGCC TGTTGCTGACCATCGCCAGCCTCGGCGATGACTTGGCGCAGATCGAAAACGCGCCGCCGCTGCTGGCGGTCGACACCCTCGACAGCGCGCTTGCCGAGCG
|
|
Amino Acid Sequence |
>thioesterase
MSAPTRLRLFCLPYSGASAMVYVCWRRVLPDWLQVCPLELPGRGMRMDEPLQRDIGALAAQLADEISRDLNGPYALFGHSLGGLLAFELAHALKARNVPA PLALFASGTAGPARRDVSEYAREKTDEQLIARLRDLQGTAEAALANRELMQLMLPILRADFLLCGSFAYGRREPLGMPIHVFGGKQDSVRADQLLDWQAD AASGFSLDLFDGHHFFLVQHESAVLRCVRRYAEEHLARWRNGAARRLTAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|