Pseudomonas veronii R4, SU91_RS08865 (relA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas veronii strain R4 scaffold00001, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTCGCGGTGGAAGGCGTGCAGGCCATGGTCGAGCGTGCGGCGCTGAATGCCGTCAGCAATAATTTGCATAATGTGCAGTTTTTTCAGGCCGATTTGTCCC AGTCGTTGACTGACGCGGAATGGGCCAAACAGGGCTTTTCTGCGGTACTCTTGGACCCACCTCGCGACGGTGCCCTGGAGGTTGTGCGCAAGCTCGCCAG CCTGGGGGCCAAGCGCCTGGTGTACGTGTCCTGCAATCCGGCGACGCTGGCGCGGGACACGGTTGAGTTGGTCAAGCAGGGTTACCGGCTAAAACGTGCC GGGATCCTCGACATGTTTCCGCAAACCGCGCATGTCGAGGCGATGGCGTTATTTGAGGCGGGCTAGGATGCCCGTTTAATCCGACTGGCCTGCATTCTCC TGGGCCGTGACCTGCCAGGGAGTGTGTGAGCTTTAGTGATAAAGCAGGTCAGCGATGATTTTTGGCGCATCGAAGGTGCGTCGTAGGGAAGGTAAGCAAG
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| DNA Sequence for Gene |
>SU91_RS08865
|relA
ATGGTACAGGTGAGAGCACACCAGCCGATCAACACCGACGGCAGTATCAATCTCGAGGCATGGCTGGATCATGCCATCAGTGTCGACCCGGCACTGGACC GTGAAGCCTTGAAAGCAGCCTGCGAGTTCGCTCGTGAGTCTGAACAGCAAGACAATGCGGCCAAGAACCTGTGGGCCGAAGGCACTTCGAGCTTTCGCAC CGGCTTGGAAATCGCTGAGATCCTCGCCGATCTCAAGCTCGACCAGGATTCGCTGATCGCTGCCGTGCTCTATCGCGGCGTGCGTGAAGGGCATATCCCG TTGGCCACCGTGGGCCAGCGCTTCGGCTCCGTGGTGGCCAAGCTGATCGACGGCGTGCTGCGCATGGCCGCCATCAGCGCCAGCCTCAGTCCGCGCCAGT CCATGGTGCTGGGCACCCAGGGCCAGGTGGAAAACCTGCGCAAGATGCTGGTGGCGATGGTCGACGACGTGCGCGTCGCCTTGATCAAGCTGGCCGAACG CACCTGCGCGATCCGTGCGGTGAAAACCGCCGACGACGAAAAGCGCAACCGCGTGGCCCGCGAAGTCTTCGACATCTACGCACCGCTGGCGCACCGCCTG GGTATCGGCCATATCAAGTGGGAGCTGGAGGACTTGTCCTTCCGCTACCTCGAACCCGACCAATACAAACAGATCGCCACGCTGCTGCATGAGCGCCGGC TCGACCGCGAGCGTTTCATCACCGACGTGATGGGCCAGCTGCGCGCCGAGTTGCAGGCTACCGGCGTCGACGCCGACATCAGCGGCCGCGCCAAGCACAT CTATTCGATCTGGCGCAAAATGCAGCGCAAGGGCCTGGCCTTCAGCCAGATCTACGACGTGCGCGCCGTGCGCGTGCTGGTGCCGGAAATGCGCGACTGC TACACCGCGCTCGGTATCGTCCACACCCTGTGGCGGCACATCCCCAAGGAGTTCGACGACTACATCGCCAACCCCAAGGAAAACGGCTATCGCTCGCTGC ACACTGCGGTGATCGGCCCCGAGGGCAAGGTGCTGGAAGTGCAGATCCGCACCCACGCCATGCACGAAGAGGCGGAGCTGGGGGTGTGCGCGCACTGGCG CTACAAGGGCACCGACGTCAAGGCCGGGTCCAACCAGTACGAAGAGAAGATCTCCTGGCTGCGCCAAGTGCTGGAGTGGCACGAAGAACTCGGCGACATC GGCGGCCTGGCCGAACAGCTGCGGGTGGATATCGAGCCGGACCGGGTCTACATCTTCACCCCCGACGGCCACGCCATCGACCTGCCGAAGGGCGCCACGC CGCTGGACTTCGCCTACCGCGTGCACACCGAAATCGGCCACAACTGCCGGGGCGCCAAGATCAACGGGCGCATCGTGCCGCTCAACTACAGCCTGCAGAC CGGCGAGCAGGTCGAGATCATCACCAGCAAGCACGGCACGCCGAGCCGCGACTGGCTGAACCCGAACCTGGGCTACATCACCACCTCGCGGGCGCGGGCG AAGATCGTCCACTGGTTCAAGCTGCAGGCGCGCGACCAGAACGTCGCCGCCGGCAAAAGCCTGCTCGAACGCGAACTGGCGCGCCTGGGCCTGCCTCAGG TGGACTTCGACAAGCTGGCCGAAAAGGCCAACATGAAGATCGCCGAAGACATGTTCGCCGCCCTCGGTGCCGGCGACCTGCGCCTGGCGCAACTGGTCAA CCTGGCCCAGCAACTGGTGGAGCCGGAACGCGGCAACGAACAGCTGGAGCTGATCCCGCGCAAAGCCACCGGCTACAAGCCCGGCAAGCGTGGCGATATC CAGATCCAGGGCGTCGGCAACCTGATGACGCAAATGGCCGGTTGCTGCCAGCCGCTGCCGGGCGACGCCATCGTCGGCTACATCACCCAGGGCCGTGGCG TGAGCATTCACCGCCAGGACTGCGCCTCGGTGCTGCAACTGGGCGGGCGCGAGCCGGAGCGAATCATCCAGGTCAGCTGGGGCCCGGTGCCGGTGCTCAC CTATCCGGTGGACATCATCATCCGTGCCTACGACCGTTCCGGTCTGCTGCGCGACGTGTCGCAAGTGCTGCTCAACGAGCGGATCAACGTGCTGGCCGTC AACACCCGCTCGAACAAGGAGGACAACACCGCGTTGATGTCCCTAACCATCGAGATTCCGGGGCTGGACGCGTTGGGGCGGTTG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
NNNNNNNNNNNNNNNNNNNNNNNNNCCTACGCGAGCATCGTCCCGCACACCCTGGAAGAGGCCTACGAAGTCGCCGACGCCATCGAGCGTGGCGACTTCG ATCACCTGCAAGGCGAGTTGGGCGACCTGTTGTTCCAGGTGGTGTATTACAGCCAGCTGGCACAGGAAGAAGGGCGCTTCGAGTTTGCCGGGGTGATCGA CAGCATCACCCGCAAGCTGATTCGACGTCATCCCCATGTGTTCCCCACCGGCGATCTGTACGCGCCGCTGGATATCCCGCAGTTGAGCGAAGAGCAGGTC AAGACGCGTTGGGAGCAGATCAAGGCCGAGGAGCGCGCGGAAAAGTCCGACGCCCCCGAGCAACTGTCCCTGCTCGACGATGTGCCCACCGCCTTGCCGT CGCTGTCCCGTGCCGCCAAATTGCAGAAGCGCGCCAGCCAGGTCGGTTTCGACTGGCCCGCTGCGTTGCCGGTGGTGGATAACGTGCGCGAAGAGCTGGA
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| Amino Acid Sequence |
>(p)ppGpp synthetase
MVQVRAHQPINTDGSINLEAWLDHAISVDPALDREALKAACEFARESEQQDNAAKNLWAEGTSSFRTGLEIAEILADLKLDQDSLIAAVLYRGVREGHIP LATVGQRFGSVVAKLIDGVLRMAAISASLSPRQSMVLGTQGQVENLRKMLVAMVDDVRVALIKLAERTCAIRAVKTADDEKRNRVAREVFDIYAPLAHRL GIGHIKWELEDLSFRYLEPDQYKQIATLLHERRLDRERFITDVMGQLRAELQATGVDADISGRAKHIYSIWRKMQRKGLAFSQIYDVRAVRVLVPEMRDC YTALGIVHTLWRHIPKEFDDYIANPKENGYRSLHTAVIGPEGKVLEVQIRTHAMHEEAELGVCAHWRYKGTDVKAGSNQYEEKISWLRQVLEWHEELGDI GGLAEQLRVDIEPDRVYIFTPDGHAIDLPKGATPLDFAYRVHTEIGHNCRGAKINGRIVPLNYSLQTGEQVEIITSKHGTPSRDWLNPNLGYITTSRARA KIVHWFKLQARDQNVAAGKSLLERELARLGLPQVDFDKLAEKANMKIAEDMFAALGAGDLRLAQLVNLAQQLVEPERGNEQLELIPRKATGYKPGKRGDI QIQGVGNLMTQMAGCCQPLPGDAIVGYITQGRGVSIHRQDCASVLQLGGREPERIIQVSWGPVPVLTYPVDIIIRAYDRSGLLRDVSQVLLNERINVLAV NTRSNKEDNTALMSLTIEIPGLDALGRL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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