Strain | Pseudomonas veronii strain R4 scaffold00001, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGTCTTGATCTGATCCGCCAACTGCGCGCCCAGGACAAGACCTTCCCGATCCTGATCCTCACCGCTCGCGGCAACTGGCAGGACAAGGTCGAAGGCCTGG CCGCCGGCGCCGACGACTACGTGGTCAAGCCGTTCCAGTTCGAAGAACTGGAAGCGCGGATGAACGCGTTGCTGCGTCGTTCCAGCGGCTTTACCCAATC GACCATCGTCGCCGGCCCCTTGCTGCTGGACCTCAACCGCAAGCAGGCCTCGTTGGACGAGCAACCCCTGGCGCTGACCGCCTACGAGTACCGGATTCTC GAGTACCTGATGCGTCACCATCAGCAGGTAGTGCCCAAGGACCGCTTGATGGAACAGCTCTACCCCGATGACGACGAGCGCGACCCGAATGTCATCGAAG TGCTGGTCGGCCGCCTGCGCCGTAAACTGGAAGGCCCGGGCGGGTTCAAGCCGATCGACACCGTGCGTGGCCTGGGCTATCTGTTCAATGAGCGCTGTCG
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DNA Sequence for Gene |
>SU91_RS07840
TTGATTCGCTCGTTACGTGTGCGCTTGATGCTGGCGGCCGCCACCCTGGCCGTGCTGTTTATGCTGGGTTTGTTGCCGGCCATGCAGGGCGCGTTCAGCC TGGCCTTGCAGGACTCGATCGAGCAGCGCCTGGCGTCGGACGTCACCACCTTGATTTCGGCGGCGCGGGTTGAAAACAACCGCCTGCAGATGCCGGCGCA GTTGCCGGACGAACGCTTCAACCTCACCGATAGCCGGTTGCTCGGTTATATCTACGACCGCGAAGGCCATCTGGTGTGGCGCTCGCGGGCGACCCAGGAA GAAAACATCAACTACAGGCCGCGCTATGACGGGCGCGGTAATGAGTTTGCGCGGATTCGCGAGGGCAATGGCCAGGAATTCTTCGTGTATGACGTCGAGG TCAAGCTGCTCGGCGGCAAGAGTGCGGCGTTCAGCATCGTCGCGCTGCAACCGGTGCGCGAATACCAGTTGACCCTCGAAGGCCTGCGCGAAAACCTCTA CCTGGGCTTCGGCGCGGCGTTGCTGGTGTTGCTGACGTTGCTCTGGCTGGGCCTGACCTGGGGCCTGCAAGCGTTGCGGCGCCTGAGCCAGGAGCTGGAC CAGATCGAAGGCGGCACCCGCGAAAGCCTCAGCGAAGAACACCCGCGCGAACTGCTGCGCCTCACCGGGTCTCTCAACCGCTTGCTGCACAGTGAGCGCG AGCAGCGTACCCGCTACCGCGACTCCCTCGACGACTTGGCCCACAGCCTGAAAACCCCGCTGGCGGTGTTGCAGGGCGTGAGCGAAGACATGGCCCAGCG CCCCGAAGACCGCGACCAGGCCTGGGTGCTGCAATCGCAGATCGAACGCATGAGCCAGCAGATCAGCTACCAGTTGCAGCGCGCCAGCCTGCGTAAAAGC GGCCTGGTACGCCATCAGGTACGCCTGCAGCCGGTACTGCAAAGCCTGTGCGACACGCTGGACAAGGTCTACCGCGACAAGCACGTCAAAGTGAGCTTCG TATTGCCGGACGCGTGCGATGTGCCCATCGAAAAAGGCGCCTTGCTGGAACTGCTCGGCAACCTGCTGGAAAACGCCTACCGCCTGTGCCTGAGCGAAGT GCGTATCAGCCTGGTGGAAAGCCTGGATGGCATCGAACTGTGCATCGAAGATGACGGCCCCGGTGTGCCGCCCGACCAGCGCGCGCGGATTCTGCAACGG GGCGAGCGGCTGGACCGCCAGCACCCGGGGCAGGGGATCGGCCTGGCGGTGGTCAAGGACATCATTGAAAGCTACGGCGCGCGCCTGACCCTGGGCGACT CGCCTTTGGGGGGCGCGGCGTTCAAGATCCACTTTCCGGCCGTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCTTCCTTGAGTGGGGCCTGCCTAACTCTCCTGTGCCCGATAAGCCCCCGGCGTCAATCCCGTCCACTTCTTGAACGCCCGATGAAACGCCGACGGCTCG GAGAACCCGAGCTGCTCGGCAATTTCCTGCAATGACAGATCCGCGCGTCCCAGGTGGTAAATGGCGATGTCCCGCCGCAGCTCATCCTTGAGCGCTTGAA AACTGCTGCCTTCTTCACGCAGATGTCGGCGCAGGGTCTGCGGGCTGATGTGCAGGTGCTGGGCAACGGCGTCCAGGTCCGGCCAGGGTGTGCGGTCACG GCTGAGCAGGCGGCGGATCTGGCTGCTCAAACTGTCGCCCTCATCGGGCCGCGACAACAAGTCGGCGGGGGAGCGCTGCAGGAAATGCTTGAGGGTGCGC TCGTCCTGCAGCAGCGGCAGGCTCAAGTAACGGGCAGGAAACACCAGGCTGCTGTTCGGTGCGTCGAACACCTGCGGGCAGGGAAACAACAAGTCGTACT
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Amino Acid Sequence |
>histidine kinase
MIRSLRVRLMLAAATLAVLFMLGLLPAMQGAFSLALQDSIEQRLASDVTTLISAARVENNRLQMPAQLPDERFNLTDSRLLGYIYDREGHLVWRSRATQE ENINYRPRYDGRGNEFARIREGNGQEFFVYDVEVKLLGGKSAAFSIVALQPVREYQLTLEGLRENLYLGFGAALLVLLTLLWLGLTWGLQALRRLSQELD QIEGGTRESLSEEHPRELLRLTGSLNRLLHSEREQRTRYRDSLDDLAHSLKTPLAVLQGVSEDMAQRPEDRDQAWVLQSQIERMSQQISYQLQRASLRKS GLVRHQVRLQPVLQSLCDTLDKVYRDKHVKVSFVLPDACDVPIEKGALLELLGNLLENAYRLCLSEVRISLVESLDGIELCIEDDGPGVPPDQRARILQR GERLDRQHPGQGIGLAVVKDIIESYGARLTLGDSPLGGAAFKIHFPAV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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