Pseudomonas veronii R4, SU91_RS05235

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas veronii strain R4 scaffold00001, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCCGCTTGGACGTGCTGCTCGGCGACTAGAGTTCTACCCACAGGCCCTGTTCGTCTTCGCGGCCGGGCAGGGCAGTGAGGCTTTGACCTGCGCAGGGGC CGGCGATGCATTCGCCGCTCTCGATCAGGAACAACGCGCCGTGGGTGGCGCATTGGATCAGGCTGGCGCTGGCGTCGAGGAAGTGATCGGGCTGCCATTC CAGGGGGACGCCGCGATGGGGGCAGCGATTGCGATAGAAGTAGGCGATGCCATCCCGGCGCACGGCCAGCAGTTTGTGCCCGTCGATATCAAAACCACGG CTGCTGTTGGGGGCGAGGGTGTCGGAGGGGCAGAGAAACTTCATTCCAATCCTTAAGTGCCTTGACGTTCAAATGCAAACAATTATCAAATGCAGGCTTC GCCCGTTAGCTGACTGGGCGCTCAGTACGATGCCCGGCAAGAGGTATCTGTCACATCCATGAGTGTTTCAGCAGCCCCGCCCCTGGAAGGAAACCCTGTT
DNA Sequence for Gene
>SU91_RS05235
ATGCGCTTGAGTGCCAGCGCTATCGCGCTTGTTGTCGGACTGATGCTCAACCCTGGGGCGCACGCCTCGGAACTGCCGCAACGCTGGGTGAGTGCTGGCG GCGCGTTATCGGAGTGGGTGACGGCCCTGGGCGGTGAGTCGAAGTTGGTGGGCGTCGACACCACCAGCCAGCATCCGGCTTCGCTCAAGGCATTGCCGAG CGTCGGTTATCAGCGGCAGTTGTCGGCCGAGGGCATTCTCAGTCTGCGCCCGCAGGTCTTGGTGGGTACCGAGGAAATGGGGCCGCCGCCGGTGCTGGCG CAGATTCGCAACGCCGGGGTGCAGGTGGAAATGTTCTCGGCGCAGCCGGATTTGCCGACGTTGAAAGGCAACCTCGAACACCTGGGGAGGTTGTTGGGCA GTGAGGCCAAGGCCCATGCATTGTTTACCGCGTATGAACAGGCGCTTGACCGGCAGAAACGTTGGGTTGCCACAGCCCAGGCCACACACAAGGCCCCGGG GGTGTTGATGCTGCTCGGCAATGCCGGCGGCAAGCCGCTGATCGCTGGCAAAGACACGGCGGCTGACTGGATGCTGCGGCAGGCGGGCGGGCGCAACCTG GCGACCCACAGCGGTTATAAGCCGTTTTCCATGGAGTCGTTGGCCGGGTTGAGCCCCGAGGTGCTGGTGTTTGCCGACCGTGCGCTGACCGGCGAGGCGG CGCGTGCGGCCTTGTTCAAGGAGAACCCGATCCTGGCGTCCACGCCGGCGGCTAAACAGGCACGGGTGTTTGAGGTGGACCCGACGCTGCTGGTCGGCGG GCTCGGGCCGCGTCTGCCGCAAAGCCTGGTGCAGTTGTCGGCCGGCTTCTATCCGTCCCAGGCCACGTCTGCCCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTACGCTGGTGAAACCCCGAACGCTGTTTATCGGCCTGACGCTGTTGTGTGTGCTGGCGATCTGGCTTTCATTGGCGCTGGGGCCGGTCAGCCTGCCGTT GCTGGATACGCTCAGGGCGGCCTTGCGCCTGATGGGCGTGCCGATCGAGGCCAGTGGCCTGGAGCAGGCGGAGCTGATTCTCGGGCAGATCCGTTTGCCG CGGACCTTGCTGGGGCTGGCGGTGGGCGGTGTATTGGCCTTGTCGGGCGTAGCGATGCAGGGGTTGTTTCGCAACCCGTTGGCCGATCCGGGGTTGGTCG GGGTATCCAGCGGCGCGGCACTCGGTGCGGCCTTCGCCATTGTCGGTGGCTCGTTTCTGGGTGGGTTGCCGGAGGTGTTCGGCCCGTATCTGTTGTCGTT GTGCGCGTTTCTCGGTGGGTTGGGGGTGACGGCGCTGGTCTACCGGCTGGGGCGGCGCAACGGCCAGACCCATGTCGCGACCATGCTGCTCGCCGGTATC
Amino Acid Sequence
>ABC transporter substrate-binding protein
MRLSASAIALVVGLMLNPGAHASELPQRWVSAGGALSEWVTALGGESKLVGVDTTSQHPASLKALPSVGYQRQLSAEGILSLRPQVLVGTEEMGPPPVLA QIRNAGVQVEMFSAQPDLPTLKGNLEHLGRLLGSEAKAHALFTAYEQALDRQKRWVATAQATHKAPGVLMLLGNAGGKPLIAGKDTAADWMLRQAGGRNL ATHSGYKPFSMESLAGLSPEVLVFADRALTGEAARAALFKENPILASTPAAKQARVFEVDPTLLVGGLGPRLPQSLVQLSAGFYPSQATSAP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site