Pseudomonas veronii R4, SU91_RS04175
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas veronii strain R4 scaffold00001, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCAGTGGACGCCACCCGCGCAACAGCACGCGCCCGACACGGTCGTGGTGCCTCGCGCCGCACCGGGTGCTTCGGCTGCCGGTGGGCAATACCTGCAGGT GGGCGCTTTCGCCAACCCGGATGCGGCAGAGCTGTTAAGGTCCAAGCTGAGCAGTATGGTCAATGCGCCGGTCTTCATCAGTTCCATCGTGCGTAATCAA CAGACCCTGCACCGTGTGCGTATGGGCCCGATCGGTTCGCCGAGCGAGGTCGCGCAAGTGCAGAACAGCGTGCGCCTGGCCAACCTGGGGCAACCCAGCG TGGTCAGCGCCGAATAAACCGTAAAGGATTGATGGTTCAGGTCCGTGCGCGGGCCTGGGCCCTGGTTGTTGGCTCGTTGAACAATAAAACCCAGGGGCAA GGGGTGAGCAGGCAACCGAACACGCGACAGACCGGTAACGGGCTGTCTGAATAAGTTTTGCCCGCGAGGGCAAGTTTCCATACGTAATTTCGAGAGACGG
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| DNA Sequence for Gene |
>SU91_RS04175
ATGAACATCATCACCTTAGCCAAACGCACGTGCCTGCTTATCTCGCTGATCATCACCCCGGCCGCCTGGGCGGTTGAAATGGTGCCGGCTTCACCGCAAC TGGCCGCCAAGGCCTGGGTCCTCATGGATGCCGCCAGTGGCAACGTGCTGGTGGAAAACAACGGTGACCAGCGCCTGCCGCCCGCCAGCTTGACCAAGCT GATGACAGCCTATATCGCGACCCTGGAAATCCGTCGCGGCCAGATCGGCGAAAACGACCCGGTGACCGTCAGCGAAAACGCCTGGCGCACCGGTGGTTCG CGGATGTTCATCAAGGTTGGCTCGCAGGTGACGGTCAGTGACCTGCTGCACGGCATCATCATCCAGTCCGGTAACGACGCCAGCGTCGCCCTGTCCGAGC ACATCGCCGGCAGCGAAGACGCGTTCGCCGACATGATGAACAAAACCGTGGCCGACCTGGGCATGACCAACAGCCACTTCATGAACCCGACCGGTCTGCC GAACCCAGAGCACTACTCGTCGGCTCACGACATGGCGATCCTGGCGCGCGCGATCATTCGTGTCGACCCGGTCCACTACGCGATCTACTCCCAGAAGGAA TTCTTCTGGAACAACATCAAACAGCCTAACCGCAACCTGTTGCTGTGGCGCGACAAGACCGTCGACGGTCTGAAAACCGGCCACACCGAAGAAGCCGGCT ACTGCATGGTGTCGTCCGCCGTGCGTGATGGCCAGCGCCTGATCGCCGTGGTCTTCGGCACCAACAGCGAGCAGGCCCGTGCGGCCGAGACGCAAAAACT GCTGACCTACGGTTTCCGCTTCTTCGAAACCCAGACCTTCTATCAGAAGGGTGCTGAACTGGCGACCGCGCCGGTATGGAAAGGCGCAACCTCGCAAGTC AAGGCCGGCCTGGCTGAAGACCTGACCCTGACCATGCCTAAAGGCCAGCTGAAAAAGCTCGCGGCCAGCATGACCATGAACCCGCACCTGGTTGCGCCAA TCGCCAAGGGCGACGTGATCGGCAAGGTCGAAGTGAAGCTGGACGATAAAGTGGTACACAGTGCCGACCTGATCGCCCTGGATGCCGTCGACGAGGGTGG TATCTTCCGCCGCGTGTGGGATAGCATCCGCCTGTTCTTCTACAGCTTGTTCAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TAAGTGTGCACCTGCAAAGCCCCGTGTTGATCCGACGCGGGGCTTTGCCCGTCGCCACGGCTTACGCTTACGAGGCCGTTACGCCATGACCGATAAAGAA GTAAAGGCGCCAAAGATCGAATTCCCGGTGACGGATTATCCCGTCAAGGTGATCAGCGATACCGGTGTGGGCAACAAGGACAAGATTCTCGACATCGTGC GTAAACACGCGACGATCAACGACAACCGTGTGGATGAGCGTTCGAGCACCAACGGTAAGTACACCACGATCCAGTTGCACATCGTTGCGACCGGTCAAGA CCAGCTTTACGACATCAACAGCGAACTGCGGGCCACCGGCTTCGTACATATGGTGCTGTGATGCCACAGGTCCTGGGCTTTCGCGAGCTCGGCCGGATGG ACTACGAGCCCGTCTGGCATGCAATGCAGCGCTTCACCAACGAGCGCGGCACCTCGGCACCCGATGAGATCTGGCTGGTGGAACACCCGCCGGTGTTCAC
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| Amino Acid Sequence |
>D-alanyl-D-alanine carboxypeptidase
MNIITLAKRTCLLISLIITPAAWAVEMVPASPQLAAKAWVLMDAASGNVLVENNGDQRLPPASLTKLMTAYIATLEIRRGQIGENDPVTVSENAWRTGGS RMFIKVGSQVTVSDLLHGIIIQSGNDASVALSEHIAGSEDAFADMMNKTVADLGMTNSHFMNPTGLPNPEHYSSAHDMAILARAIIRVDPVHYAIYSQKE FFWNNIKQPNRNLLLWRDKTVDGLKTGHTEEAGYCMVSSAVRDGQRLIAVVFGTNSEQARAAETQKLLTYGFRFFETQTFYQKGAELATAPVWKGATSQV KAGLAEDLTLTMPKGQLKKLAASMTMNPHLVAPIAKGDVIGKVEVKLDDKVVHSADLIALDAVDEGGIFRRVWDSIRLFFYSLFN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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