Pseudomonas veronii R4, SU91_RS01275

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas veronii strain R4 scaffold00001, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TATCCGAGCTGCGGCCGATAGCCATCGAGCCCTGGTTCAAGGACTTTTCGGCACACTGCCCAGGGGTAATCTTGTGATAACTAGTGATAGTCAAACACAG CGACATCTTGCCTCCTTGCTGATACTTCGCGCGCAATCGATTCCCGGCGAGCGCCTTTCCCGAGAGATCGCGCCAGGCGACGCAAACCACGGTCATAATC TGCTTTTTGCCAGCATGATCGCAGATCTTAACTGGCCTCAATGACAAAAACCCTATCGTGGAACACCACTCGACTCACCAGTCGCGCAGGTTGTTAAGTA CCGCACATCTGTCACAGAGGGCGAATAGCTTACCTTGACAAGCCATAACTACTACACCAAAAATGCACAACTTCTTGAATACCAGTGATGGCACATTAGT GGCGCCACGTGTATATGACCAAGAAAACATGCAAAGTTCATCACGCAACTAATGCATGAATTGCCCGTCATCTAACGGGCCGATAGGGAGATCGATTTCA
DNA Sequence for Gene
>SU91_RS01275
GTGGATGTGCCGTTGCTGCTCGCCGCCGTTTCCGCGACTTCGCCATGTGGCGAAGACATGGAATATGACGCGCAATTTCTACAACTGGAGCGTGATGCCA AGGGGCAGCCCGAGCGCAGCATGGGCGACGCCATCCTGCCTGCCGAACCGCCGGACTGGCGCAGCATCCAGCAGCAAAGCCTCGACCTGTTGCAACGCAG CAAAGACCTGCGCATCACCCATTTCCTGCTGCAAAGCGCCCTCGCCCTCCAGGGTGTGGTCGGGTTGGCCGACGCGCTCACGCTGATCAACGCGCTGCTG CGCGAATACTGGGCCGACCTGCACCCGCGCCTGGATGCCGACGACGATAACGACCCCACCGTGCGTATCAACGCCCTGTCCGGCTTGACCGGCGACGCGA CGATCCGCCTGCTGCGCGAAAGCATCCTCACGCGCTCGCGCACCTTCGGCGCCGTGAGCCTGCGCGCCGCGCTGAACGCCAGCGGCCTGATGAGTTTTCC CGATGAACAACTCGGCGCCCAGCAGCTCAACGCCGCGTTCCTCGACAGCGACCCCGAGCAACTGCAAGCCACCCGCGACGCCTTGAGCACCGCGCGTGCC GCCTGCGAAGCCATCGAACAACAGGTCAGCGACCAGGTCGGCTCGGCCCAGGGCGTCGACCTCAGCCTGTTGAAGCAACCGCTCAAGCAGGCGCTGCAGA TCCTCAGCCAATTTGTACCGAACGGTGAGACCAGCAGCCGCGAACCCGAGGCCGTCAGTGACGACAATGCCCCCTCGGCCGACTTCGCCGCCGCCCCCAC CGCACCGCGCCCCAGCGGCGACATCGCCAACCGCGATGACGTGCTGCGCAGCCTCGACAAGATCCTTGCGTACTACACCCGTCACGAGCCTTCGAGCCCG CTGCCGGTGCTGTTGAACCGCGCAAAGCATCTGGTGCACGCCGACTTCGCGGCCATCGTGCGCAATCTGATTCCCGACGGCATGTCCCAATTTGAAAACC TGCGTGGCCCGGACGGCGAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCGCCCGACTGCGCAGTAACAACACCGTCGCTCAAGCGACCAGGAGCAGCAACGTGGCGAAGCAAAGTTCTCAGAAATTCATCGCGCGCAACCGCGCGC CTCGAGTGCAGATCGAGTACGACGTCGAGCTCTACGGCGCCGAGAAAAAGGTCCAGCTGCCCTTCGTGATGGGTGTGATGGCCGACCTCGCCGGCAAACC CGCCGAGCCCCTCGCGCCCGTGGCCGACCGCAAGTTCCTTGAAGTAGACGTCGACAACTTCGACTCGCGCCTCAAGGCCATGCAACCGCGCGTAGCGTTC CACGTACCCAACGAGCTGACCGGCGAAGGCAACCTGAGCCTGGACATCACTTTCGAAAGCATGGACGACTTCAGCCCGGCCGCCGTGGCTCGCAAGGTCG ATGCGCTGAACAAGCTGCTCGAAGCCCGCACCCAGTTGGCCAACCTGCTGACCTACATGGACGGCAAGACCGGCGCTGAAGAAATCATCATGAAAGCGAT
Amino Acid Sequence
>type VI secretion protein ImpA
MDVPLLLAAVSATSPCGEDMEYDAQFLQLERDAKGQPERSMGDAILPAEPPDWRSIQQQSLDLLQRSKDLRITHFLLQSALALQGVVGLADALTLINALL REYWADLHPRLDADDDNDPTVRINALSGLTGDATIRLLRESILTRSRTFGAVSLRAALNASGLMSFPDEQLGAQQLNAAFLDSDPEQLQATRDALSTARA ACEAIEQQVSDQVGSAQGVDLSLLKQPLKQALQILSQFVPNGETSSREPEAVSDDNAPSADFAAAPTAPRPSGDIANRDDVLRSLDKILAYYTRHEPSSP LPVLLNRAKHLVHADFAAIVRNLIPDGMSQFENLRGPDGE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site