Pseudomonas veronii R4, SU91_RS00250
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas veronii strain R4 scaffold00001, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGGGTGAGTTCCAACTACGCGGCGGTGGCCTGTATCGATTTGCCCACCTGCCATGGCCAGTGGTGGCCGGCGGCGGACTTTGCCAATGGCTTCCACCTGA CCCAGCACATCGGCCCCAATTACCTCGGCGGCCAGCTCGACAGCGACGCGCGCACGGCCATTCACCTGACCCACCGCATCGGCGCGCTGCTGGTCACCCT GGTATTGCTGGGCCTGGCCTGGCAGCTGCGCGCGGTGGGTATGACCCGGCTCGCGGGCCTGCTGCTGATCGCCCTGGCGGCACAGATCGGCCTGGGCCTG AGCAACGTGTATTTCCACCTGCCGCTGCCGGTGGCGGTCGGTCACAACGCCGGTGGCGCAGCCTTGTTGCTGACCCTGGTACTGGTCAATTACCACGCCC GTACCAGCCTGGTCCGGGTGCGCCGCCAGATGCCGTTCGGCTGGCGCTTCAGCCCGCGTAAACACGTATCGGGCCTTATCACCCTCAAAGGAGAGATGCC
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| DNA Sequence for Gene |
>SU91_RS00250
ATGGCGACCTTGATCGGCGCGCGTCACGGCCAGGCGATCTGGCGTGACTACCTGGAGCTGACCAAGCCGAAAGTGGTGGTGCTGATGCTCATCACCTCGC TGGTGGGCATGTTCCTCGCCACCCGCGCCGGGGTGCCGTGGGCGGTGCTGATCTTCGGCAACCTGGGGATCGCCCTGTGTGCCGGTGGCGCGGCGGTGGT CAACCACGTCGTCGATCGGCGCATCGATACGCTGATGGCGCGCACGCAAAAGCGCCCGATCGCCCAGGGGCGTGTGTCGCCCGGAGCGGCGCTGGCCTTT GCTTTGTTTCTGGCTGTTGCCGGGTTGGCGCTGCTGCTGGCGTTCACCAACCCGCTGGCGGCCTGGCTGACGCTGGCTTCGTTGCTCGGTTATGCGGTGA TCTACACCGGCTTTCTCAAGCGCGCGACGCCGCAGAACATCGTCATCGGTGGCCTGGCTGGCGCGGCGCCGCCGCTGTTGGGCTGGGTTGCGGTCACCGG GCATGTCAGCGCCGAGCCGCTGCTGCTGGTGCTGATCATCTTCGCCTGGACCCCGCCGCACTTCTGGGCCCTGGCCATTCACCGCAAGGAGGAATACGCC AAGGCCGATATTCCGATGCTGCCGGTCACCCATGGCGAGCACTACACCAAGGTGCATATCCTGCTCTACACCTGCGTCCTGCTGGCGGTGAGCCTGATGC CCTACGTCATCCATATGAGCGGCCTGCTGTACCTCGGATCTGCGCTGGTGTTGGGCGCACGCTTTCTGCAATGGGCCTGGGTGCTGTACCGTGGCGCTCA GCCGCACGCGGCGATCAACACGTTCAAGTACTCTATCTGGTACCTGTTCCTGCTGTTTATCGCCCTGCTTGTAGACCACTACTTACTGTTGAACCTATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCGAACTCAAAAAACTGTCTTCATTCTGGTGGCCATTGTCGCGTTGATCATGGGCCTGACCGTCAACAAAGTGCTCTCGGGCAAGGGCCAGGGCGACCC GACCGCCTTGATCGATGCCGGCATCATCCTGCTGCCGCAAAGCCGCCAATTGCCGCCGGTGACCATGACCAACCAGGACGGCCAGCCGGTGCTGGTCAAC GAGTTGAAGGGCAAGTGGAGCCTGCTGTTCTTCGGCTACACCTTCTGCCCGGACATCTGCCCCACCACCCTCGCCCAACTGCGCCAGATCAAGAGCGAGT TGCCCAAAGAGGCTGTGGATAAGTTGCAGGTGATCCTGGTCAGCGTCGACCCGAACCGCGACACGCCGACTCAGCTCAAGCAATACCTGGGCTATTTCGA CCCGCAATTCGAAGGCCTGACCGGCGCGAATGTGGACGATGTGCAGAAGGTGTCGAACGCGGTGAGCATCCCGTTCATTCCGGCGGACACGACCAAGCCG
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| Amino Acid Sequence |
>protoheme IX farnesyltransferase
MATLIGARHGQAIWRDYLELTKPKVVVLMLITSLVGMFLATRAGVPWAVLIFGNLGIALCAGGAAVVNHVVDRRIDTLMARTQKRPIAQGRVSPGAALAF ALFLAVAGLALLLAFTNPLAAWLTLASLLGYAVIYTGFLKRATPQNIVIGGLAGAAPPLLGWVAVTGHVSAEPLLLVLIIFAWTPPHFWALAIHRKEEYA KADIPMLPVTHGEHYTKVHILLYTCVLLAVSLMPYVIHMSGLLYLGSALVLGARFLQWAWVLYRGAQPHAAINTFKYSIWYLFLLFIALLVDHYLLLNL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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