Pseudomonas veronii R4, SU91_RS00155
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 528 | 697 | 9.4E-57 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 540 | 695 | 7.26338E-64 |
| FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 531 | 697 | 1.0E-51 |
| Coils | Coil | Coil | - | - | 421 | 441 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 178 | 248 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 184 | 211 | - |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 537 | 693 | 2.7E-45 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 230 | 244 | - |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 535 | 696 | 8.4E-49 |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 542 | 695 | 2.12E-49 |
| Coils | Coil | Coil | - | - | 502 | 536 | - |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 523 | 697 | 1.0E-58 |
| PANTHER | PTHR45138 | REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM | - | - | 399 | 696 | 2.9E-71 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.